Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9290 | 28093;28094;28095 | chr2:178711962;178711961;178711960 | chr2:179576689;179576688;179576687 |
N2AB | 8973 | 27142;27143;27144 | chr2:178711962;178711961;178711960 | chr2:179576689;179576688;179576687 |
N2A | 8046 | 24361;24362;24363 | chr2:178711962;178711961;178711960 | chr2:179576689;179576688;179576687 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1256283190 | None | 0.004 | N | 0.263 | 0.105 | 0.12205267543 | gnomAD-4.0.0 | 1.62297E-06 | None | None | None | None | N | None | 0 | 2.33634E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/S | rs1196673354 | -1.29 | 0.043 | N | 0.291 | 0.093 | 0.184867976434 | gnomAD-2.1.1 | 4.14E-06 | None | None | None | None | N | None | 0 | 2.97E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/S | rs1196673354 | -1.29 | 0.043 | N | 0.291 | 0.093 | 0.184867976434 | gnomAD-4.0.0 | 1.62302E-06 | None | None | None | None | N | None | 0 | 2.33754E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0565 | likely_benign | 0.0717 | benign | -1.032 | Destabilizing | 0.004 | N | 0.263 | neutral | N | 0.399854625 | None | None | N |
T/C | 0.2861 | likely_benign | 0.3906 | ambiguous | -0.49 | Destabilizing | 0.992 | D | 0.748 | deleterious | None | None | None | None | N |
T/D | 0.6637 | likely_pathogenic | 0.7994 | pathogenic | -0.781 | Destabilizing | 0.816 | D | 0.776 | deleterious | None | None | None | None | N |
T/E | 0.6849 | likely_pathogenic | 0.8269 | pathogenic | -0.588 | Destabilizing | 0.816 | D | 0.763 | deleterious | None | None | None | None | N |
T/F | 0.5252 | ambiguous | 0.7542 | pathogenic | -0.674 | Destabilizing | 0.969 | D | 0.795 | deleterious | None | None | None | None | N |
T/G | 0.2112 | likely_benign | 0.2697 | benign | -1.454 | Destabilizing | 0.69 | D | 0.719 | prob.delet. | None | None | None | None | N |
T/H | 0.5122 | ambiguous | 0.7197 | pathogenic | -1.457 | Destabilizing | 0.997 | D | 0.769 | deleterious | None | None | None | None | N |
T/I | 0.3201 | likely_benign | 0.5147 | ambiguous | 0.073 | Stabilizing | 0.922 | D | 0.793 | deleterious | N | 0.482531936 | None | None | N |
T/K | 0.603 | likely_pathogenic | 0.7811 | pathogenic | -0.223 | Destabilizing | 0.816 | D | 0.768 | deleterious | None | None | None | None | N |
T/L | 0.1965 | likely_benign | 0.3775 | ambiguous | 0.073 | Stabilizing | 0.816 | D | 0.695 | prob.neutral | None | None | None | None | N |
T/M | 0.1535 | likely_benign | 0.2866 | benign | 0.054 | Stabilizing | 0.997 | D | 0.759 | deleterious | None | None | None | None | N |
T/N | 0.2609 | likely_benign | 0.3915 | ambiguous | -0.818 | Destabilizing | 0.77 | D | 0.659 | neutral | N | 0.51559787 | None | None | N |
T/P | 0.5948 | likely_pathogenic | 0.8357 | pathogenic | -0.263 | Destabilizing | 0.96 | D | 0.791 | deleterious | N | 0.51585136 | None | None | N |
T/Q | 0.5198 | ambiguous | 0.7073 | pathogenic | -0.604 | Destabilizing | 0.969 | D | 0.799 | deleterious | None | None | None | None | N |
T/R | 0.4579 | ambiguous | 0.676 | pathogenic | -0.443 | Destabilizing | 0.94 | D | 0.796 | deleterious | None | None | None | None | N |
T/S | 0.1072 | likely_benign | 0.1248 | benign | -1.146 | Destabilizing | 0.043 | N | 0.291 | neutral | N | 0.469720142 | None | None | N |
T/V | 0.1867 | likely_benign | 0.29 | benign | -0.263 | Destabilizing | 0.69 | D | 0.6 | neutral | None | None | None | None | N |
T/W | 0.8753 | likely_pathogenic | 0.9627 | pathogenic | -0.761 | Destabilizing | 0.997 | D | 0.767 | deleterious | None | None | None | None | N |
T/Y | 0.5416 | ambiguous | 0.7905 | pathogenic | -0.388 | Destabilizing | 0.99 | D | 0.801 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.