Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9292 | 28099;28100;28101 | chr2:178711956;178711955;178711954 | chr2:179576683;179576682;179576681 |
N2AB | 8975 | 27148;27149;27150 | chr2:178711956;178711955;178711954 | chr2:179576683;179576682;179576681 |
N2A | 8048 | 24367;24368;24369 | chr2:178711956;178711955;178711954 | chr2:179576683;179576682;179576681 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.999 | N | 0.809 | 0.498 | 0.583773441324 | gnomAD-4.0.0 | 1.62989E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.92677E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9159 | likely_pathogenic | 0.9499 | pathogenic | -2.692 | Highly Destabilizing | 0.997 | D | 0.698 | prob.neutral | None | None | None | None | N |
L/C | 0.8266 | likely_pathogenic | 0.8979 | pathogenic | -2.076 | Highly Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
L/D | 0.9981 | likely_pathogenic | 0.9991 | pathogenic | -3.024 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
L/E | 0.9902 | likely_pathogenic | 0.9944 | pathogenic | -2.717 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
L/F | 0.155 | likely_benign | 0.2357 | benign | -1.607 | Destabilizing | 0.999 | D | 0.809 | deleterious | N | 0.504500919 | None | None | N |
L/G | 0.9835 | likely_pathogenic | 0.9912 | pathogenic | -3.321 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
L/H | 0.9365 | likely_pathogenic | 0.9699 | pathogenic | -2.9 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | D | 0.557941538 | None | None | N |
L/I | 0.1211 | likely_benign | 0.146 | benign | -0.828 | Destabilizing | 0.992 | D | 0.666 | neutral | N | 0.49742012 | None | None | N |
L/K | 0.9836 | likely_pathogenic | 0.9891 | pathogenic | -2.023 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
L/M | 0.2491 | likely_benign | 0.3122 | benign | -0.964 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
L/N | 0.9902 | likely_pathogenic | 0.994 | pathogenic | -2.6 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
L/P | 0.9878 | likely_pathogenic | 0.9945 | pathogenic | -1.435 | Destabilizing | 1.0 | D | 0.885 | deleterious | D | 0.557941538 | None | None | N |
L/Q | 0.9401 | likely_pathogenic | 0.9655 | pathogenic | -2.297 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
L/R | 0.9548 | likely_pathogenic | 0.9719 | pathogenic | -1.99 | Destabilizing | 1.0 | D | 0.882 | deleterious | D | 0.557941538 | None | None | N |
L/S | 0.9746 | likely_pathogenic | 0.9865 | pathogenic | -3.325 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
L/T | 0.9307 | likely_pathogenic | 0.9576 | pathogenic | -2.842 | Highly Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
L/V | 0.1504 | likely_benign | 0.2088 | benign | -1.435 | Destabilizing | 0.767 | D | 0.405 | neutral | N | 0.520233815 | None | None | N |
L/W | 0.7473 | likely_pathogenic | 0.8748 | pathogenic | -1.998 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
L/Y | 0.8251 | likely_pathogenic | 0.8997 | pathogenic | -1.725 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.