Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9294 | 28105;28106;28107 | chr2:178711950;178711949;178711948 | chr2:179576677;179576676;179576675 |
N2AB | 8977 | 27154;27155;27156 | chr2:178711950;178711949;178711948 | chr2:179576677;179576676;179576675 |
N2A | 8050 | 24373;24374;24375 | chr2:178711950;178711949;178711948 | chr2:179576677;179576676;179576675 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 1.0 | D | 0.908 | 0.759 | 0.926651531717 | gnomAD-4.0.0 | 2.08206E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.72548E-06 | 0 | 0 |
V/I | rs368775401 | -0.804 | 0.999 | D | 0.741 | 0.433 | None | gnomAD-2.1.1 | 8.49E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.87E-05 | 0 |
V/I | rs368775401 | -0.804 | 0.999 | D | 0.741 | 0.433 | None | gnomAD-4.0.0 | 6.24617E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.53088E-05 | None | 0 | 0 | 6.35946E-06 | 1.21919E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5976 | likely_pathogenic | 0.5796 | pathogenic | -1.741 | Destabilizing | 0.999 | D | 0.78 | deleterious | D | 0.623393793 | None | None | N |
V/C | 0.9541 | likely_pathogenic | 0.9533 | pathogenic | -1.56 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
V/D | 0.9889 | likely_pathogenic | 0.9917 | pathogenic | -1.728 | Destabilizing | 1.0 | D | 0.898 | deleterious | D | 0.640018567 | None | None | N |
V/E | 0.9673 | likely_pathogenic | 0.975 | pathogenic | -1.673 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
V/F | 0.7475 | likely_pathogenic | 0.8022 | pathogenic | -1.282 | Destabilizing | 1.0 | D | 0.908 | deleterious | D | 0.639413154 | None | None | N |
V/G | 0.8346 | likely_pathogenic | 0.8392 | pathogenic | -2.092 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | D | 0.640018567 | None | None | N |
V/H | 0.99 | likely_pathogenic | 0.9924 | pathogenic | -1.54 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
V/I | 0.0866 | likely_benign | 0.0984 | benign | -0.844 | Destabilizing | 0.999 | D | 0.741 | deleterious | D | 0.536879001 | None | None | N |
V/K | 0.9711 | likely_pathogenic | 0.9755 | pathogenic | -1.292 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
V/L | 0.5677 | likely_pathogenic | 0.6259 | pathogenic | -0.844 | Destabilizing | 0.999 | D | 0.779 | deleterious | D | 0.605356389 | None | None | N |
V/M | 0.5724 | likely_pathogenic | 0.6366 | pathogenic | -0.939 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
V/N | 0.9586 | likely_pathogenic | 0.9641 | pathogenic | -1.252 | Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
V/P | 0.9061 | likely_pathogenic | 0.9174 | pathogenic | -1.112 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
V/Q | 0.9641 | likely_pathogenic | 0.9693 | pathogenic | -1.388 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
V/R | 0.9524 | likely_pathogenic | 0.9583 | pathogenic | -0.887 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
V/S | 0.8381 | likely_pathogenic | 0.8345 | pathogenic | -1.862 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
V/T | 0.726 | likely_pathogenic | 0.6699 | pathogenic | -1.693 | Destabilizing | 0.999 | D | 0.857 | deleterious | None | None | None | None | N |
V/W | 0.9939 | likely_pathogenic | 0.9966 | pathogenic | -1.46 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
V/Y | 0.9763 | likely_pathogenic | 0.9822 | pathogenic | -1.149 | Destabilizing | 1.0 | D | 0.912 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.