Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9301 | 28126;28127;28128 | chr2:178711335;178711334;178711333 | chr2:179576062;179576061;179576060 |
N2AB | 8984 | 27175;27176;27177 | chr2:178711335;178711334;178711333 | chr2:179576062;179576061;179576060 |
N2A | 8057 | 24394;24395;24396 | chr2:178711335;178711334;178711333 | chr2:179576062;179576061;179576060 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs372056758 | -0.092 | 1.0 | D | 0.892 | 0.815 | None | gnomAD-2.1.1 | 4.1E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.01E-06 | 0 |
P/L | rs372056758 | -0.092 | 1.0 | D | 0.892 | 0.815 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.5885 | likely_pathogenic | 0.6777 | pathogenic | -1.378 | Destabilizing | 1.0 | D | 0.842 | deleterious | D | 0.631407038 | None | None | N |
P/C | 0.9723 | likely_pathogenic | 0.9835 | pathogenic | -1.488 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
P/D | 0.9988 | likely_pathogenic | 0.9993 | pathogenic | -1.037 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
P/E | 0.9957 | likely_pathogenic | 0.9975 | pathogenic | -1.042 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
P/F | 0.9956 | likely_pathogenic | 0.997 | pathogenic | -1.351 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
P/G | 0.9773 | likely_pathogenic | 0.9871 | pathogenic | -1.644 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
P/H | 0.9915 | likely_pathogenic | 0.9948 | pathogenic | -1.184 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
P/I | 0.9288 | likely_pathogenic | 0.9507 | pathogenic | -0.751 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
P/K | 0.9963 | likely_pathogenic | 0.998 | pathogenic | -0.931 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
P/L | 0.8309 | likely_pathogenic | 0.8716 | pathogenic | -0.751 | Destabilizing | 1.0 | D | 0.892 | deleterious | D | 0.625310036 | None | None | N |
P/M | 0.9796 | likely_pathogenic | 0.985 | pathogenic | -0.801 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
P/N | 0.9966 | likely_pathogenic | 0.9978 | pathogenic | -0.817 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
P/Q | 0.9872 | likely_pathogenic | 0.9926 | pathogenic | -1.022 | Destabilizing | 1.0 | D | 0.883 | deleterious | D | 0.657550562 | None | None | N |
P/R | 0.9845 | likely_pathogenic | 0.9917 | pathogenic | -0.533 | Destabilizing | 1.0 | D | 0.891 | deleterious | D | 0.657550562 | None | None | N |
P/S | 0.9409 | likely_pathogenic | 0.9603 | pathogenic | -1.424 | Destabilizing | 1.0 | D | 0.894 | deleterious | D | 0.631608842 | None | None | N |
P/T | 0.9101 | likely_pathogenic | 0.9392 | pathogenic | -1.314 | Destabilizing | 1.0 | D | 0.89 | deleterious | D | 0.657348758 | None | None | N |
P/V | 0.8262 | likely_pathogenic | 0.8672 | pathogenic | -0.928 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
P/W | 0.9992 | likely_pathogenic | 0.9996 | pathogenic | -1.435 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
P/Y | 0.9975 | likely_pathogenic | 0.9984 | pathogenic | -1.095 | Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.