Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9304 | 28135;28136;28137 | chr2:178711326;178711325;178711324 | chr2:179576053;179576052;179576051 |
N2AB | 8987 | 27184;27185;27186 | chr2:178711326;178711325;178711324 | chr2:179576053;179576052;179576051 |
N2A | 8060 | 24403;24404;24405 | chr2:178711326;178711325;178711324 | chr2:179576053;179576052;179576051 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs186512181 | None | None | N | 0.129 | 0.258 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92456E-04 | None | 0 | 0 | 0 | 0 | 0 |
S/P | rs186512181 | None | None | N | 0.129 | 0.258 | None | gnomAD-4.0.0 | 6.56418E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.92901E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0971 | likely_benign | 0.0819 | benign | -0.417 | Destabilizing | 0.001 | N | 0.091 | neutral | N | 0.428848514 | None | None | N |
S/C | 0.1808 | likely_benign | 0.1726 | benign | -0.275 | Destabilizing | 0.921 | D | 0.287 | neutral | N | 0.477986651 | None | None | N |
S/D | 0.3892 | ambiguous | 0.4013 | ambiguous | 0.218 | Stabilizing | 0.418 | N | 0.095 | neutral | None | None | None | None | N |
S/E | 0.439 | ambiguous | 0.4528 | ambiguous | 0.129 | Stabilizing | 0.228 | N | 0.103 | neutral | None | None | None | None | N |
S/F | 0.1992 | likely_benign | 0.1684 | benign | -0.998 | Destabilizing | 0.794 | D | 0.351 | neutral | N | 0.476972693 | None | None | N |
S/G | 0.1257 | likely_benign | 0.1143 | benign | -0.536 | Destabilizing | 0.129 | N | 0.145 | neutral | None | None | None | None | N |
S/H | 0.2452 | likely_benign | 0.2627 | benign | -1.054 | Destabilizing | 0.94 | D | 0.289 | neutral | None | None | None | None | N |
S/I | 0.1435 | likely_benign | 0.1285 | benign | -0.235 | Destabilizing | 0.264 | N | 0.229 | neutral | None | None | None | None | N |
S/K | 0.439 | ambiguous | 0.483 | ambiguous | -0.439 | Destabilizing | 0.228 | N | 0.102 | neutral | None | None | None | None | N |
S/L | 0.0998 | likely_benign | 0.0846 | benign | -0.235 | Destabilizing | 0.129 | N | 0.203 | neutral | None | None | None | None | N |
S/M | 0.2301 | likely_benign | 0.21 | benign | 0.057 | Stabilizing | 0.836 | D | 0.29 | neutral | None | None | None | None | N |
S/N | 0.1471 | likely_benign | 0.1428 | benign | -0.186 | Destabilizing | 0.418 | N | 0.129 | neutral | None | None | None | None | N |
S/P | 0.1554 | likely_benign | 0.1712 | benign | -0.266 | Destabilizing | None | N | 0.129 | neutral | N | 0.491494483 | None | None | N |
S/Q | 0.3456 | ambiguous | 0.3693 | ambiguous | -0.44 | Destabilizing | 0.593 | D | 0.238 | neutral | None | None | None | None | N |
S/R | 0.3279 | likely_benign | 0.3625 | ambiguous | -0.248 | Destabilizing | 0.418 | N | 0.327 | neutral | None | None | None | None | N |
S/T | 0.0981 | likely_benign | 0.0771 | benign | -0.31 | Destabilizing | None | N | 0.077 | neutral | N | 0.374147238 | None | None | N |
S/V | 0.1734 | likely_benign | 0.1435 | benign | -0.266 | Destabilizing | 0.004 | N | 0.173 | neutral | None | None | None | None | N |
S/W | 0.3249 | likely_benign | 0.3313 | benign | -0.987 | Destabilizing | 0.983 | D | 0.302 | neutral | None | None | None | None | N |
S/Y | 0.1813 | likely_benign | 0.1629 | benign | -0.708 | Destabilizing | 0.921 | D | 0.332 | neutral | N | 0.465869877 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.