Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9308 | 28147;28148;28149 | chr2:178711314;178711313;178711312 | chr2:179576041;179576040;179576039 |
N2AB | 8991 | 27196;27197;27198 | chr2:178711314;178711313;178711312 | chr2:179576041;179576040;179576039 |
N2A | 8064 | 24415;24416;24417 | chr2:178711314;178711313;178711312 | chr2:179576041;179576040;179576039 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.002 | N | 0.143 | 0.102 | 0.201204373187 | gnomAD-4.0.0 | 6.85874E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.01313E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.355 | ambiguous | 0.3398 | benign | 0.146 | Stabilizing | 0.329 | N | 0.338 | neutral | None | None | None | None | I |
R/C | 0.3022 | likely_benign | 0.2782 | benign | -0.035 | Destabilizing | 0.995 | D | 0.355 | neutral | None | None | None | None | I |
R/D | 0.6391 | likely_pathogenic | 0.6085 | pathogenic | -0.127 | Destabilizing | 0.704 | D | 0.459 | neutral | None | None | None | None | I |
R/E | 0.351 | ambiguous | 0.3073 | benign | -0.053 | Destabilizing | 0.329 | N | 0.363 | neutral | None | None | None | None | I |
R/F | 0.5691 | likely_pathogenic | 0.5383 | ambiguous | -0.024 | Destabilizing | 0.981 | D | 0.391 | neutral | None | None | None | None | I |
R/G | 0.2201 | likely_benign | 0.2161 | benign | -0.057 | Destabilizing | 0.425 | N | 0.391 | neutral | N | 0.484517922 | None | None | I |
R/H | 0.1164 | likely_benign | 0.1135 | benign | -0.634 | Destabilizing | 0.981 | D | 0.431 | neutral | None | None | None | None | I |
R/I | 0.3036 | likely_benign | 0.2697 | benign | 0.649 | Stabilizing | 0.863 | D | 0.409 | neutral | N | 0.484771412 | None | None | I |
R/K | 0.0933 | likely_benign | 0.0944 | benign | 0.039 | Stabilizing | 0.002 | N | 0.143 | neutral | N | 0.419885967 | None | None | I |
R/L | 0.2532 | likely_benign | 0.2384 | benign | 0.649 | Stabilizing | 0.495 | N | 0.407 | neutral | None | None | None | None | I |
R/M | 0.2765 | likely_benign | 0.2523 | benign | 0.093 | Stabilizing | 0.981 | D | 0.408 | neutral | None | None | None | None | I |
R/N | 0.5066 | ambiguous | 0.4847 | ambiguous | 0.2 | Stabilizing | 0.704 | D | 0.369 | neutral | None | None | None | None | I |
R/P | 0.6211 | likely_pathogenic | 0.6696 | pathogenic | 0.502 | Stabilizing | 0.828 | D | 0.439 | neutral | None | None | None | None | I |
R/Q | 0.1144 | likely_benign | 0.1068 | benign | 0.161 | Stabilizing | 0.704 | D | 0.428 | neutral | None | None | None | None | I |
R/S | 0.4176 | ambiguous | 0.396 | ambiguous | -0.041 | Destabilizing | 0.065 | N | 0.172 | neutral | N | 0.453481253 | None | None | I |
R/T | 0.2228 | likely_benign | 0.2054 | benign | 0.167 | Stabilizing | 0.01 | N | 0.145 | neutral | N | 0.467623986 | None | None | I |
R/V | 0.3895 | ambiguous | 0.3565 | ambiguous | 0.502 | Stabilizing | 0.704 | D | 0.467 | neutral | None | None | None | None | I |
R/W | 0.1797 | likely_benign | 0.1685 | benign | -0.127 | Destabilizing | 0.995 | D | 0.36 | neutral | None | None | None | None | I |
R/Y | 0.4341 | ambiguous | 0.4102 | ambiguous | 0.285 | Stabilizing | 0.981 | D | 0.411 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.