Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC931028153;28154;28155 chr2:178711308;178711307;178711306chr2:179576035;179576034;179576033
N2AB899327202;27203;27204 chr2:178711308;178711307;178711306chr2:179576035;179576034;179576033
N2A806624421;24422;24423 chr2:178711308;178711307;178711306chr2:179576035;179576034;179576033
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: V
  • RefSeq wild type transcript codon: GTT
  • RefSeq wild type template codon: CAA
  • Domain: Ig-79
  • Domain position: 10
  • Structural Position: 13
  • Q(SASA): 0.2379
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
V/I rs200207722 -0.32 0.001 N 0.091 0.057 None gnomAD-2.1.1 8.58E-05 None None None None I None 0 2.84E-05 None 0 0 None 0 None 0 1.79893E-04 0
V/I rs200207722 -0.32 0.001 N 0.091 0.057 None gnomAD-3.1.2 6.57E-05 None None None None I None 0 0 0 0 0 None 0 0 1.4699E-04 0 0
V/I rs200207722 -0.32 0.001 N 0.091 0.057 None gnomAD-4.0.0 7.68987E-05 None None None None I None 0 3.3379E-05 None 0 0 None 3.12578E-05 0 9.16071E-05 0 1.92234E-04

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
V/A 0.1999 likely_benign 0.2217 benign -1.555 Destabilizing 0.165 N 0.324 neutral N 0.488978601 None None I
V/C 0.7266 likely_pathogenic 0.7592 pathogenic -0.998 Destabilizing 0.981 D 0.343 neutral None None None None I
V/D 0.3955 ambiguous 0.4472 ambiguous -1.741 Destabilizing 0.773 D 0.481 neutral D 0.535470688 None None I
V/E 0.2797 likely_benign 0.3024 benign -1.619 Destabilizing 0.818 D 0.428 neutral None None None None I
V/F 0.1219 likely_benign 0.1451 benign -0.943 Destabilizing 0.627 D 0.373 neutral N 0.519314989 None None I
V/G 0.2411 likely_benign 0.2757 benign -1.995 Destabilizing 0.773 D 0.462 neutral D 0.52318933 None None I
V/H 0.4359 ambiguous 0.4694 ambiguous -1.705 Destabilizing 0.981 D 0.453 neutral None None None None I
V/I 0.0611 likely_benign 0.063 benign -0.391 Destabilizing 0.001 N 0.091 neutral N 0.467088055 None None I
V/K 0.2309 likely_benign 0.2506 benign -1.389 Destabilizing 0.818 D 0.423 neutral None None None None I
V/L 0.1394 likely_benign 0.1636 benign -0.391 Destabilizing 0.001 N 0.08 neutral N 0.505529013 None None I
V/M 0.1115 likely_benign 0.1248 benign -0.323 Destabilizing 0.054 N 0.295 neutral None None None None I
V/N 0.2523 likely_benign 0.2726 benign -1.424 Destabilizing 0.932 D 0.471 neutral None None None None I
V/P 0.8529 likely_pathogenic 0.9128 pathogenic -0.746 Destabilizing 0.932 D 0.443 neutral None None None None I
V/Q 0.24 likely_benign 0.2643 benign -1.402 Destabilizing 0.818 D 0.431 neutral None None None None I
V/R 0.1841 likely_benign 0.2034 benign -1.091 Destabilizing 0.818 D 0.477 neutral None None None None I
V/S 0.2152 likely_benign 0.2296 benign -1.984 Destabilizing 0.563 D 0.428 neutral None None None None I
V/T 0.168 likely_benign 0.1751 benign -1.736 Destabilizing 0.388 N 0.32 neutral None None None None I
V/W 0.7071 likely_pathogenic 0.7818 pathogenic -1.371 Destabilizing 0.981 D 0.516 neutral None None None None I
V/Y 0.4357 ambiguous 0.4855 ambiguous -0.971 Destabilizing 0.818 D 0.373 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.