Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9315 | 28168;28169;28170 | chr2:178711293;178711292;178711291 | chr2:179576020;179576019;179576018 |
N2AB | 8998 | 27217;27218;27219 | chr2:178711293;178711292;178711291 | chr2:179576020;179576019;179576018 |
N2A | 8071 | 24436;24437;24438 | chr2:178711293;178711292;178711291 | chr2:179576020;179576019;179576018 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | None | None | 0.999 | D | 0.815 | 0.629 | 0.833005579354 | gnomAD-4.0.0 | 1.59255E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4353E-05 | 0 |
G/V | rs1240808727 | -0.495 | 0.999 | D | 0.795 | 0.734 | 0.917018942733 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
G/V | rs1240808727 | -0.495 | 0.999 | D | 0.795 | 0.734 | 0.917018942733 | gnomAD-4.0.0 | 1.59313E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43674E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4067 | ambiguous | 0.4459 | ambiguous | -0.388 | Destabilizing | 0.992 | D | 0.635 | neutral | D | 0.631719565 | None | None | I |
G/C | 0.6314 | likely_pathogenic | 0.6897 | pathogenic | -0.851 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
G/D | 0.3087 | likely_benign | 0.4284 | ambiguous | -0.516 | Destabilizing | 0.702 | D | 0.429 | neutral | None | None | None | None | I |
G/E | 0.4201 | ambiguous | 0.5582 | ambiguous | -0.655 | Destabilizing | 0.998 | D | 0.8 | deleterious | D | 0.606858305 | None | None | I |
G/F | 0.83 | likely_pathogenic | 0.872 | pathogenic | -0.937 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | I |
G/H | 0.6674 | likely_pathogenic | 0.7563 | pathogenic | -0.698 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
G/I | 0.7936 | likely_pathogenic | 0.8684 | pathogenic | -0.373 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
G/K | 0.795 | likely_pathogenic | 0.886 | pathogenic | -0.956 | Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | I |
G/L | 0.753 | likely_pathogenic | 0.8005 | pathogenic | -0.373 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | I |
G/M | 0.8231 | likely_pathogenic | 0.8652 | pathogenic | -0.39 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | I |
G/N | 0.3735 | ambiguous | 0.4463 | ambiguous | -0.591 | Destabilizing | 0.999 | D | 0.776 | deleterious | None | None | None | None | I |
G/P | 0.9778 | likely_pathogenic | 0.9884 | pathogenic | -0.341 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
G/Q | 0.6075 | likely_pathogenic | 0.7127 | pathogenic | -0.846 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
G/R | 0.6549 | likely_pathogenic | 0.7838 | pathogenic | -0.531 | Destabilizing | 0.999 | D | 0.815 | deleterious | D | 0.622634783 | None | None | I |
G/S | 0.1763 | likely_benign | 0.1991 | benign | -0.797 | Destabilizing | 0.967 | D | 0.419 | neutral | None | None | None | None | I |
G/T | 0.4703 | ambiguous | 0.5589 | ambiguous | -0.86 | Destabilizing | 0.998 | D | 0.797 | deleterious | None | None | None | None | I |
G/V | 0.7 | likely_pathogenic | 0.8017 | pathogenic | -0.341 | Destabilizing | 0.999 | D | 0.795 | deleterious | D | 0.638855949 | None | None | I |
G/W | 0.7203 | likely_pathogenic | 0.8194 | pathogenic | -1.142 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
G/Y | 0.7084 | likely_pathogenic | 0.7911 | pathogenic | -0.78 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.