Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9316 | 28171;28172;28173 | chr2:178711290;178711289;178711288 | chr2:179576017;179576016;179576015 |
N2AB | 8999 | 27220;27221;27222 | chr2:178711290;178711289;178711288 | chr2:179576017;179576016;179576015 |
N2A | 8072 | 24439;24440;24441 | chr2:178711290;178711289;178711288 | chr2:179576017;179576016;179576015 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.996 | N | 0.393 | 0.237 | 0.733431072442 | gnomAD-4.0.0 | 6.84352E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99622E-07 | 0 | 0 |
L/R | rs78643968 | 0.015 | 0.92 | N | 0.353 | 0.207 | None | gnomAD-2.1.1 | 1.35641E-04 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.89452E-03 | None | 0 | None | 0 | 0 | 1.40489E-04 |
L/R | rs78643968 | 0.015 | 0.92 | N | 0.353 | 0.207 | None | gnomAD-3.1.2 | 3.28E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 9.61538E-04 | None | 0 | 0 | 0 | 0 | 0 |
L/R | rs78643968 | 0.015 | 0.92 | N | 0.353 | 0.207 | None | gnomAD-4.0.0 | 2.04514E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 6.90669E-04 | None | 0 | 0 | 0 | 0 | 3.20133E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1906 | likely_benign | 0.2473 | benign | -0.957 | Destabilizing | 0.863 | D | 0.286 | neutral | None | None | None | None | I |
L/C | 0.4943 | ambiguous | 0.5356 | ambiguous | -0.625 | Destabilizing | 0.999 | D | 0.333 | neutral | None | None | None | None | I |
L/D | 0.4283 | ambiguous | 0.5373 | ambiguous | -0.357 | Destabilizing | 0.884 | D | 0.339 | neutral | None | None | None | None | I |
L/E | 0.1912 | likely_benign | 0.246 | benign | -0.44 | Destabilizing | 0.17 | N | 0.233 | neutral | None | None | None | None | I |
L/F | 0.0924 | likely_benign | 0.0986 | benign | -0.878 | Destabilizing | 0.997 | D | 0.287 | neutral | None | None | None | None | I |
L/G | 0.3409 | ambiguous | 0.4373 | ambiguous | -1.158 | Destabilizing | 0.046 | N | 0.225 | neutral | None | None | None | None | I |
L/H | 0.1268 | likely_benign | 0.1468 | benign | -0.411 | Destabilizing | 0.991 | D | 0.363 | neutral | None | None | None | None | I |
L/I | 0.1111 | likely_benign | 0.1181 | benign | -0.535 | Destabilizing | 0.99 | D | 0.272 | neutral | None | None | None | None | I |
L/K | 0.1259 | likely_benign | 0.1733 | benign | -0.51 | Destabilizing | 0.884 | D | 0.321 | neutral | None | None | None | None | I |
L/M | 0.1033 | likely_benign | 0.1047 | benign | -0.376 | Destabilizing | 0.996 | D | 0.305 | neutral | N | 0.450031863 | None | None | I |
L/N | 0.1734 | likely_benign | 0.2256 | benign | -0.27 | Destabilizing | 0.969 | D | 0.384 | neutral | None | None | None | None | I |
L/P | 0.7214 | likely_pathogenic | 0.8566 | pathogenic | -0.642 | Destabilizing | 0.996 | D | 0.393 | neutral | N | 0.489550256 | None | None | I |
L/Q | 0.0802 | likely_benign | 0.1009 | benign | -0.529 | Destabilizing | 0.31 | N | 0.173 | neutral | N | 0.379995775 | None | None | I |
L/R | 0.107 | likely_benign | 0.1122 | benign | 0.102 | Stabilizing | 0.92 | D | 0.353 | neutral | N | 0.446836842 | None | None | I |
L/S | 0.1398 | likely_benign | 0.174 | benign | -0.781 | Destabilizing | 0.939 | D | 0.297 | neutral | None | None | None | None | I |
L/T | 0.184 | likely_benign | 0.2284 | benign | -0.755 | Destabilizing | 0.969 | D | 0.264 | neutral | None | None | None | None | I |
L/V | 0.1183 | likely_benign | 0.1333 | benign | -0.642 | Destabilizing | 0.959 | D | 0.232 | neutral | N | 0.503460916 | None | None | I |
L/W | 0.1792 | likely_benign | 0.2182 | benign | -0.876 | Destabilizing | 0.999 | D | 0.387 | neutral | None | None | None | None | I |
L/Y | 0.1977 | likely_benign | 0.229 | benign | -0.636 | Destabilizing | 0.997 | D | 0.31 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.