Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC931628171;28172;28173 chr2:178711290;178711289;178711288chr2:179576017;179576016;179576015
N2AB899927220;27221;27222 chr2:178711290;178711289;178711288chr2:179576017;179576016;179576015
N2A807224439;24440;24441 chr2:178711290;178711289;178711288chr2:179576017;179576016;179576015
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTG
  • RefSeq wild type template codon: GAC
  • Domain: Ig-79
  • Domain position: 16
  • Structural Position: 25
  • Q(SASA): 0.4236
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/P None None 0.996 N 0.393 0.237 0.733431072442 gnomAD-4.0.0 6.84352E-07 None None None None I None 0 0 None 0 0 None 0 0 8.99622E-07 0 0
L/R rs78643968 0.015 0.92 N 0.353 0.207 None gnomAD-2.1.1 1.35641E-04 None None None None I None 0 0 None 0 1.89452E-03 None 0 None 0 0 1.40489E-04
L/R rs78643968 0.015 0.92 N 0.353 0.207 None gnomAD-3.1.2 3.28E-05 None None None None I None 0 0 0 0 9.61538E-04 None 0 0 0 0 0
L/R rs78643968 0.015 0.92 N 0.353 0.207 None gnomAD-4.0.0 2.04514E-05 None None None None I None 0 0 None 0 6.90669E-04 None 0 0 0 0 3.20133E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.1906 likely_benign 0.2473 benign -0.957 Destabilizing 0.863 D 0.286 neutral None None None None I
L/C 0.4943 ambiguous 0.5356 ambiguous -0.625 Destabilizing 0.999 D 0.333 neutral None None None None I
L/D 0.4283 ambiguous 0.5373 ambiguous -0.357 Destabilizing 0.884 D 0.339 neutral None None None None I
L/E 0.1912 likely_benign 0.246 benign -0.44 Destabilizing 0.17 N 0.233 neutral None None None None I
L/F 0.0924 likely_benign 0.0986 benign -0.878 Destabilizing 0.997 D 0.287 neutral None None None None I
L/G 0.3409 ambiguous 0.4373 ambiguous -1.158 Destabilizing 0.046 N 0.225 neutral None None None None I
L/H 0.1268 likely_benign 0.1468 benign -0.411 Destabilizing 0.991 D 0.363 neutral None None None None I
L/I 0.1111 likely_benign 0.1181 benign -0.535 Destabilizing 0.99 D 0.272 neutral None None None None I
L/K 0.1259 likely_benign 0.1733 benign -0.51 Destabilizing 0.884 D 0.321 neutral None None None None I
L/M 0.1033 likely_benign 0.1047 benign -0.376 Destabilizing 0.996 D 0.305 neutral N 0.450031863 None None I
L/N 0.1734 likely_benign 0.2256 benign -0.27 Destabilizing 0.969 D 0.384 neutral None None None None I
L/P 0.7214 likely_pathogenic 0.8566 pathogenic -0.642 Destabilizing 0.996 D 0.393 neutral N 0.489550256 None None I
L/Q 0.0802 likely_benign 0.1009 benign -0.529 Destabilizing 0.31 N 0.173 neutral N 0.379995775 None None I
L/R 0.107 likely_benign 0.1122 benign 0.102 Stabilizing 0.92 D 0.353 neutral N 0.446836842 None None I
L/S 0.1398 likely_benign 0.174 benign -0.781 Destabilizing 0.939 D 0.297 neutral None None None None I
L/T 0.184 likely_benign 0.2284 benign -0.755 Destabilizing 0.969 D 0.264 neutral None None None None I
L/V 0.1183 likely_benign 0.1333 benign -0.642 Destabilizing 0.959 D 0.232 neutral N 0.503460916 None None I
L/W 0.1792 likely_benign 0.2182 benign -0.876 Destabilizing 0.999 D 0.387 neutral None None None None I
L/Y 0.1977 likely_benign 0.229 benign -0.636 Destabilizing 0.997 D 0.31 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.