Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9317 | 28174;28175;28176 | chr2:178711287;178711286;178711285 | chr2:179576014;179576013;179576012 |
N2AB | 9000 | 27223;27224;27225 | chr2:178711287;178711286;178711285 | chr2:179576014;179576013;179576012 |
N2A | 8073 | 24442;24443;24444 | chr2:178711287;178711286;178711285 | chr2:179576014;179576013;179576012 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | rs2076618020 | None | 0.999 | None | 0.754 | 0.318 | 0.335661160332 | gnomAD-4.0.0 | 1.59188E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77285E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1241 | likely_benign | 0.1165 | benign | -0.927 | Destabilizing | 0.767 | D | 0.382 | neutral | N | 0.510965679 | None | None | N |
P/C | 0.8038 | likely_pathogenic | 0.7708 | pathogenic | -0.759 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
P/D | 0.6065 | likely_pathogenic | 0.6453 | pathogenic | -0.445 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
P/E | 0.4484 | ambiguous | 0.4804 | ambiguous | -0.491 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
P/F | 0.7603 | likely_pathogenic | 0.7516 | pathogenic | -0.73 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
P/G | 0.4339 | ambiguous | 0.4181 | ambiguous | -1.172 | Destabilizing | 0.997 | D | 0.701 | prob.neutral | None | None | None | None | N |
P/H | 0.3419 | ambiguous | 0.351 | ambiguous | -0.588 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
P/I | 0.6843 | likely_pathogenic | 0.689 | pathogenic | -0.392 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
P/K | 0.5028 | ambiguous | 0.5682 | pathogenic | -0.784 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
P/L | 0.2627 | likely_benign | 0.2678 | benign | -0.392 | Destabilizing | 0.999 | D | 0.792 | deleterious | N | 0.454628931 | None | None | N |
P/M | 0.5892 | likely_pathogenic | 0.5662 | pathogenic | -0.388 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
P/N | 0.4695 | ambiguous | 0.4783 | ambiguous | -0.569 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
P/Q | 0.2702 | likely_benign | 0.2934 | benign | -0.751 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
P/R | 0.2861 | likely_benign | 0.3375 | benign | -0.253 | Destabilizing | 0.999 | D | 0.85 | deleterious | None | None | None | None | N |
P/S | 0.1737 | likely_benign | 0.1622 | benign | -1.072 | Destabilizing | 0.998 | D | 0.734 | prob.delet. | None | None | None | None | N |
P/T | 0.2125 | likely_benign | 0.2037 | benign | -1.006 | Destabilizing | 0.999 | D | 0.754 | deleterious | None | None | None | None | N |
P/V | 0.4731 | ambiguous | 0.476 | ambiguous | -0.533 | Destabilizing | 0.999 | D | 0.732 | prob.delet. | None | None | None | None | N |
P/W | 0.8319 | likely_pathogenic | 0.8389 | pathogenic | -0.844 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
P/Y | 0.6956 | likely_pathogenic | 0.6938 | pathogenic | -0.562 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.