Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9318 | 28177;28178;28179 | chr2:178711284;178711283;178711282 | chr2:179576011;179576010;179576009 |
N2AB | 9001 | 27226;27227;27228 | chr2:178711284;178711283;178711282 | chr2:179576011;179576010;179576009 |
N2A | 8074 | 24445;24446;24447 | chr2:178711284;178711283;178711282 | chr2:179576011;179576010;179576009 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | rs368920200 | -1.094 | 0.968 | None | 0.752 | 0.243 | None | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 1.29216E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/F | rs368920200 | -1.094 | 0.968 | None | 0.752 | 0.243 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/F | rs368920200 | -1.094 | 0.968 | None | 0.752 | 0.243 | None | gnomAD-4.0.0 | 2.02987E-06 | None | None | None | None | N | None | 3.49406E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1929 | likely_benign | 0.2493 | benign | -1.782 | Destabilizing | 0.64 | D | 0.507 | neutral | None | None | None | None | N |
V/C | 0.893 | likely_pathogenic | 0.9089 | pathogenic | -1.432 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/D | 0.9442 | likely_pathogenic | 0.9668 | pathogenic | -1.79 | Destabilizing | 0.968 | D | 0.791 | deleterious | None | None | None | None | N |
V/E | 0.8757 | likely_pathogenic | 0.91 | pathogenic | -1.632 | Destabilizing | 0.976 | D | 0.762 | deleterious | None | None | None | None | N |
V/F | 0.4909 | ambiguous | 0.5851 | pathogenic | -1.106 | Destabilizing | 0.968 | D | 0.752 | deleterious | None | None | None | None | N |
V/G | 0.574 | likely_pathogenic | 0.6719 | pathogenic | -2.272 | Highly Destabilizing | 0.896 | D | 0.754 | deleterious | None | None | None | None | N |
V/H | 0.9498 | likely_pathogenic | 0.9634 | pathogenic | -1.891 | Destabilizing | 0.999 | D | 0.782 | deleterious | None | None | None | None | N |
V/I | 0.0879 | likely_benign | 0.1003 | benign | -0.46 | Destabilizing | 0.011 | N | 0.191 | neutral | None | None | None | None | N |
V/K | 0.8969 | likely_pathogenic | 0.9209 | pathogenic | -1.487 | Destabilizing | 0.976 | D | 0.758 | deleterious | None | None | None | None | N |
V/L | 0.3356 | likely_benign | 0.408 | ambiguous | -0.46 | Destabilizing | 0.64 | D | 0.439 | neutral | None | None | None | None | N |
V/M | 0.2557 | likely_benign | 0.304 | benign | -0.506 | Destabilizing | 0.976 | D | 0.617 | neutral | None | None | None | None | N |
V/N | 0.8485 | likely_pathogenic | 0.8914 | pathogenic | -1.622 | Destabilizing | 0.976 | D | 0.803 | deleterious | None | None | None | None | N |
V/P | 0.9714 | likely_pathogenic | 0.9863 | pathogenic | -0.868 | Destabilizing | 0.988 | D | 0.787 | deleterious | None | None | None | None | N |
V/Q | 0.8553 | likely_pathogenic | 0.8901 | pathogenic | -1.544 | Destabilizing | 0.988 | D | 0.795 | deleterious | None | None | None | None | N |
V/R | 0.8346 | likely_pathogenic | 0.8674 | pathogenic | -1.246 | Destabilizing | 0.988 | D | 0.823 | deleterious | None | None | None | None | N |
V/S | 0.5109 | ambiguous | 0.5907 | pathogenic | -2.29 | Highly Destabilizing | 0.307 | N | 0.435 | neutral | None | None | None | None | N |
V/T | 0.2541 | likely_benign | 0.2933 | benign | -1.981 | Destabilizing | 0.851 | D | 0.568 | neutral | None | None | None | None | N |
V/W | 0.9814 | likely_pathogenic | 0.9893 | pathogenic | -1.476 | Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
V/Y | 0.9213 | likely_pathogenic | 0.9455 | pathogenic | -1.096 | Destabilizing | 0.996 | D | 0.762 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.