Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9319 | 28180;28181;28182 | chr2:178711281;178711280;178711279 | chr2:179576008;179576007;179576006 |
N2AB | 9002 | 27229;27230;27231 | chr2:178711281;178711280;178711279 | chr2:179576008;179576007;179576006 |
N2A | 8075 | 24448;24449;24450 | chr2:178711281;178711280;178711279 | chr2:179576008;179576007;179576006 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | None | None | 0.216 | 0.072 | 0.296679040009 | gnomAD-4.0.0 | 1.59204E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43542E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1077 | likely_benign | 0.1195 | benign | -1.306 | Destabilizing | 0.019 | N | 0.309 | neutral | None | None | None | None | I |
V/C | 0.6532 | likely_pathogenic | 0.6594 | pathogenic | -1.001 | Destabilizing | 0.859 | D | 0.421 | neutral | None | None | None | None | I |
V/D | 0.2596 | likely_benign | 0.3067 | benign | -0.835 | Destabilizing | 0.175 | N | 0.483 | neutral | None | None | None | None | I |
V/E | 0.1837 | likely_benign | 0.2046 | benign | -0.796 | Destabilizing | 0.055 | N | 0.397 | neutral | None | None | None | None | I |
V/F | 0.1404 | likely_benign | 0.1437 | benign | -0.882 | Destabilizing | 0.427 | N | 0.517 | neutral | None | None | None | None | I |
V/G | 0.1603 | likely_benign | 0.1768 | benign | -1.652 | Destabilizing | None | N | 0.46 | neutral | None | None | None | None | I |
V/H | 0.301 | likely_benign | 0.3324 | benign | -1.057 | Destabilizing | 0.667 | D | 0.481 | neutral | None | None | None | None | I |
V/I | 0.0762 | likely_benign | 0.0773 | benign | -0.453 | Destabilizing | None | N | 0.216 | neutral | None | None | None | None | I |
V/K | 0.1398 | likely_benign | 0.1755 | benign | -1.064 | Destabilizing | 0.002 | N | 0.35 | neutral | None | None | None | None | I |
V/L | 0.1424 | likely_benign | 0.1535 | benign | -0.453 | Destabilizing | None | N | 0.231 | neutral | None | None | None | None | I |
V/M | 0.1155 | likely_benign | 0.1182 | benign | -0.49 | Destabilizing | 0.497 | N | 0.393 | neutral | None | None | None | None | I |
V/N | 0.156 | likely_benign | 0.1706 | benign | -0.97 | Destabilizing | 0.22 | N | 0.501 | neutral | None | None | None | None | I |
V/P | 0.6624 | likely_pathogenic | 0.7672 | pathogenic | -0.702 | Destabilizing | 0.364 | N | 0.518 | neutral | None | None | None | None | I |
V/Q | 0.1566 | likely_benign | 0.1834 | benign | -1.036 | Destabilizing | 0.011 | N | 0.342 | neutral | None | None | None | None | I |
V/R | 0.1211 | likely_benign | 0.1468 | benign | -0.641 | Destabilizing | 0.001 | N | 0.427 | neutral | None | None | None | None | I |
V/S | 0.1096 | likely_benign | 0.1159 | benign | -1.556 | Destabilizing | 0.055 | N | 0.375 | neutral | None | None | None | None | I |
V/T | 0.091 | likely_benign | 0.0965 | benign | -1.384 | Destabilizing | 0.002 | N | 0.204 | neutral | None | None | None | None | I |
V/W | 0.7 | likely_pathogenic | 0.7398 | pathogenic | -1.07 | Destabilizing | 0.958 | D | 0.509 | neutral | None | None | None | None | I |
V/Y | 0.4094 | ambiguous | 0.4307 | ambiguous | -0.757 | Destabilizing | 0.667 | D | 0.507 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.