Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9321 | 28186;28187;28188 | chr2:178711275;178711274;178711273 | chr2:179576002;179576001;179576000 |
N2AB | 9004 | 27235;27236;27237 | chr2:178711275;178711274;178711273 | chr2:179576002;179576001;179576000 |
N2A | 8077 | 24454;24455;24456 | chr2:178711275;178711274;178711273 | chr2:179576002;179576001;179576000 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | rs762498001 | 0.282 | 0.859 | None | 0.732 | 0.368 | 0.802398120638 | gnomAD-4.0.0 | 4.77797E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.31072E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1897 | likely_benign | 0.2046 | benign | -0.497 | Destabilizing | 0.124 | N | 0.568 | neutral | None | None | None | None | N |
D/C | 0.6799 | likely_pathogenic | 0.7066 | pathogenic | -0.183 | Destabilizing | 0.968 | D | 0.739 | prob.delet. | None | None | None | None | N |
D/E | 0.1381 | likely_benign | 0.1537 | benign | -0.769 | Destabilizing | None | N | 0.237 | neutral | None | None | None | None | N |
D/F | 0.607 | likely_pathogenic | 0.6039 | pathogenic | -0.11 | Destabilizing | 0.89 | D | 0.731 | prob.delet. | None | None | None | None | N |
D/G | 0.2208 | likely_benign | 0.2384 | benign | -0.86 | Destabilizing | 0.22 | N | 0.491 | neutral | None | None | None | None | N |
D/H | 0.2079 | likely_benign | 0.2322 | benign | -0.429 | Destabilizing | 0.667 | D | 0.658 | neutral | None | None | None | None | N |
D/I | 0.3654 | ambiguous | 0.3816 | ambiguous | 0.464 | Stabilizing | 0.726 | D | 0.716 | prob.delet. | None | None | None | None | N |
D/K | 0.2864 | likely_benign | 0.3231 | benign | -0.304 | Destabilizing | 0.157 | N | 0.486 | neutral | None | None | None | None | N |
D/L | 0.3819 | ambiguous | 0.3982 | ambiguous | 0.464 | Stabilizing | 0.567 | D | 0.663 | neutral | None | None | None | None | N |
D/M | 0.6435 | likely_pathogenic | 0.6714 | pathogenic | 0.893 | Stabilizing | 0.968 | D | 0.727 | prob.delet. | None | None | None | None | N |
D/N | 0.1048 | likely_benign | 0.1111 | benign | -0.792 | Destabilizing | 0.22 | N | 0.438 | neutral | None | None | None | None | N |
D/P | 0.8172 | likely_pathogenic | 0.8545 | pathogenic | 0.17 | Stabilizing | 0.726 | D | 0.608 | neutral | None | None | None | None | N |
D/Q | 0.2345 | likely_benign | 0.277 | benign | -0.644 | Destabilizing | 0.157 | N | 0.443 | neutral | None | None | None | None | N |
D/R | 0.2885 | likely_benign | 0.3209 | benign | -0.152 | Destabilizing | 0.396 | N | 0.649 | neutral | None | None | None | None | N |
D/S | 0.1117 | likely_benign | 0.1148 | benign | -1.038 | Destabilizing | 0.157 | N | 0.427 | neutral | None | None | None | None | N |
D/T | 0.1963 | likely_benign | 0.2138 | benign | -0.736 | Destabilizing | 0.272 | N | 0.533 | neutral | None | None | None | None | N |
D/V | 0.2249 | likely_benign | 0.2403 | benign | 0.17 | Stabilizing | 0.497 | N | 0.665 | neutral | None | None | None | None | N |
D/W | 0.8776 | likely_pathogenic | 0.8924 | pathogenic | 0.061 | Stabilizing | 0.968 | D | 0.705 | prob.neutral | None | None | None | None | N |
D/Y | 0.2552 | likely_benign | 0.258 | benign | 0.142 | Stabilizing | 0.859 | D | 0.732 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.