Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9329 | 28210;28211;28212 | chr2:178711251;178711250;178711249 | chr2:179575978;179575977;179575976 |
N2AB | 9012 | 27259;27260;27261 | chr2:178711251;178711250;178711249 | chr2:179575978;179575977;179575976 |
N2A | 8085 | 24478;24479;24480 | chr2:178711251;178711250;178711249 | chr2:179575978;179575977;179575976 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1162784959 | 0.03 | 0.999 | None | 0.687 | 0.426 | 0.805423805996 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.56E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.178 | likely_benign | 0.232 | benign | -0.389 | Destabilizing | 0.996 | D | 0.611 | neutral | None | None | None | None | I |
P/C | 0.7846 | likely_pathogenic | 0.8577 | pathogenic | -0.647 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | I |
P/D | 0.4662 | ambiguous | 0.5954 | pathogenic | -0.335 | Destabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | I |
P/E | 0.3675 | ambiguous | 0.4937 | ambiguous | -0.453 | Destabilizing | 0.994 | D | 0.616 | neutral | None | None | None | None | I |
P/F | 0.6447 | likely_pathogenic | 0.7603 | pathogenic | -0.68 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
P/G | 0.4216 | ambiguous | 0.5409 | ambiguous | -0.496 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | I |
P/H | 0.3674 | ambiguous | 0.4764 | ambiguous | -0.087 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | I |
P/I | 0.4779 | ambiguous | 0.6141 | pathogenic | -0.259 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
P/K | 0.4497 | ambiguous | 0.5892 | pathogenic | -0.42 | Destabilizing | 0.998 | D | 0.628 | neutral | None | None | None | None | I |
P/L | 0.2544 | likely_benign | 0.3333 | benign | -0.259 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | I |
P/M | 0.4665 | ambiguous | 0.5673 | pathogenic | -0.415 | Destabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | I |
P/N | 0.3848 | ambiguous | 0.498 | ambiguous | -0.158 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
P/Q | 0.3086 | likely_benign | 0.4087 | ambiguous | -0.399 | Destabilizing | 0.985 | D | 0.52 | neutral | None | None | None | None | I |
P/R | 0.3387 | likely_benign | 0.4504 | ambiguous | 0.083 | Stabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | I |
P/S | 0.2499 | likely_benign | 0.3402 | ambiguous | -0.482 | Destabilizing | 0.999 | D | 0.63 | neutral | None | None | None | None | I |
P/T | 0.1921 | likely_benign | 0.2723 | benign | -0.502 | Destabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | I |
P/V | 0.3401 | ambiguous | 0.4509 | ambiguous | -0.27 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | I |
P/W | 0.8169 | likely_pathogenic | 0.8965 | pathogenic | -0.758 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | I |
P/Y | 0.5776 | likely_pathogenic | 0.6968 | pathogenic | -0.461 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.