Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9333 | 28222;28223;28224 | chr2:178711239;178711238;178711237 | chr2:179575966;179575965;179575964 |
N2AB | 9016 | 27271;27272;27273 | chr2:178711239;178711238;178711237 | chr2:179575966;179575965;179575964 |
N2A | 8089 | 24490;24491;24492 | chr2:178711239;178711238;178711237 | chr2:179575966;179575965;179575964 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 0.965 | None | 0.643 | 0.608 | 0.729836406417 | gnomAD-4.0.0 | 1.59109E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0993 | likely_benign | 0.0933 | benign | -0.775 | Destabilizing | 0.003 | N | 0.301 | neutral | None | None | None | None | N |
S/C | 0.1622 | likely_benign | 0.1525 | benign | -0.404 | Destabilizing | 0.965 | D | 0.643 | neutral | None | None | None | None | N |
S/D | 0.3979 | ambiguous | 0.4055 | ambiguous | 0.015 | Stabilizing | 0.575 | D | 0.511 | neutral | None | None | None | None | N |
S/E | 0.4597 | ambiguous | 0.4565 | ambiguous | 0.016 | Stabilizing | 0.575 | D | 0.507 | neutral | None | None | None | None | N |
S/F | 0.135 | likely_benign | 0.1231 | benign | -0.982 | Destabilizing | 0.879 | D | 0.723 | prob.delet. | None | None | None | None | N |
S/G | 0.1535 | likely_benign | 0.161 | benign | -1.023 | Destabilizing | 0.404 | N | 0.535 | neutral | None | None | None | None | N |
S/H | 0.2875 | likely_benign | 0.2682 | benign | -1.384 | Destabilizing | 0.991 | D | 0.645 | neutral | None | None | None | None | N |
S/I | 0.1423 | likely_benign | 0.1308 | benign | -0.223 | Destabilizing | 0.704 | D | 0.697 | prob.neutral | None | None | None | None | N |
S/K | 0.5886 | likely_pathogenic | 0.5848 | pathogenic | -0.599 | Destabilizing | 0.575 | D | 0.509 | neutral | None | None | None | None | N |
S/L | 0.1053 | likely_benign | 0.0924 | benign | -0.223 | Destabilizing | 0.404 | N | 0.627 | neutral | None | None | None | None | N |
S/M | 0.196 | likely_benign | 0.171 | benign | -0.007 | Destabilizing | 0.973 | D | 0.653 | neutral | None | None | None | None | N |
S/N | 0.1514 | likely_benign | 0.1516 | benign | -0.54 | Destabilizing | 0.575 | D | 0.529 | neutral | None | None | None | None | N |
S/P | 0.9365 | likely_pathogenic | 0.938 | pathogenic | -0.373 | Destabilizing | 0.879 | D | 0.657 | neutral | None | None | None | None | N |
S/Q | 0.4302 | ambiguous | 0.4159 | ambiguous | -0.638 | Destabilizing | 0.906 | D | 0.541 | neutral | None | None | None | None | N |
S/R | 0.4793 | ambiguous | 0.4816 | ambiguous | -0.488 | Destabilizing | 0.826 | D | 0.657 | neutral | None | None | None | None | N |
S/T | 0.0833 | likely_benign | 0.081 | benign | -0.581 | Destabilizing | 0.003 | N | 0.377 | neutral | None | None | None | None | N |
S/V | 0.1587 | likely_benign | 0.143 | benign | -0.373 | Destabilizing | 0.404 | N | 0.634 | neutral | None | None | None | None | N |
S/W | 0.3216 | likely_benign | 0.3243 | benign | -0.964 | Destabilizing | 0.991 | D | 0.705 | prob.neutral | None | None | None | None | N |
S/Y | 0.1577 | likely_benign | 0.1544 | benign | -0.699 | Destabilizing | 0.879 | D | 0.726 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.