Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9335 | 28228;28229;28230 | chr2:178711233;178711232;178711231 | chr2:179575960;179575959;179575958 |
N2AB | 9018 | 27277;27278;27279 | chr2:178711233;178711232;178711231 | chr2:179575960;179575959;179575958 |
N2A | 8091 | 24496;24497;24498 | chr2:178711233;178711232;178711231 | chr2:179575960;179575959;179575958 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs745989523 | -0.961 | 0.427 | None | 0.526 | 0.26 | 0.265010934533 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.86E-06 | 0 |
Y/C | rs745989523 | -0.961 | 0.427 | None | 0.526 | 0.26 | 0.265010934533 | gnomAD-4.0.0 | 1.59108E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85804E-06 | 0 | 0 |
Y/N | None | None | None | None | 0.316 | 0.279 | 0.51469891142 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.4496 | ambiguous | 0.3754 | ambiguous | -2.147 | Highly Destabilizing | 0.004 | N | 0.387 | neutral | None | None | None | None | N |
Y/C | 0.2199 | likely_benign | 0.1748 | benign | -0.945 | Destabilizing | 0.427 | N | 0.526 | neutral | None | None | None | None | N |
Y/D | 0.3381 | likely_benign | 0.3057 | benign | -0.105 | Destabilizing | 0.007 | N | 0.488 | neutral | None | None | None | None | N |
Y/E | 0.493 | ambiguous | 0.4048 | ambiguous | -0.029 | Destabilizing | 0.009 | N | 0.453 | neutral | None | None | None | None | N |
Y/F | 0.0725 | likely_benign | 0.0653 | benign | -1.007 | Destabilizing | None | N | 0.123 | neutral | None | None | None | None | N |
Y/G | 0.4492 | ambiguous | 0.3795 | ambiguous | -2.441 | Highly Destabilizing | 0.009 | N | 0.473 | neutral | None | None | None | None | N |
Y/H | 0.1376 | likely_benign | 0.1118 | benign | -0.809 | Destabilizing | 0.108 | N | 0.45 | neutral | None | None | None | None | N |
Y/I | 0.3419 | ambiguous | 0.2783 | benign | -1.274 | Destabilizing | 0.009 | N | 0.428 | neutral | None | None | None | None | N |
Y/K | 0.4816 | ambiguous | 0.3781 | ambiguous | -0.765 | Destabilizing | 0.009 | N | 0.472 | neutral | None | None | None | None | N |
Y/L | 0.3069 | likely_benign | 0.2519 | benign | -1.274 | Destabilizing | None | N | 0.236 | neutral | None | None | None | None | N |
Y/M | 0.4051 | ambiguous | 0.3268 | benign | -0.977 | Destabilizing | 0.138 | N | 0.537 | neutral | None | None | None | None | N |
Y/N | 0.1353 | likely_benign | 0.1118 | benign | -0.907 | Destabilizing | None | N | 0.316 | neutral | None | None | None | None | N |
Y/P | 0.9873 | likely_pathogenic | 0.9839 | pathogenic | -1.557 | Destabilizing | 0.085 | N | 0.579 | neutral | None | None | None | None | N |
Y/Q | 0.3197 | likely_benign | 0.2439 | benign | -0.903 | Destabilizing | 0.002 | N | 0.241 | neutral | None | None | None | None | N |
Y/R | 0.3519 | ambiguous | 0.284 | benign | -0.305 | Destabilizing | 0.044 | N | 0.569 | neutral | None | None | None | None | N |
Y/S | 0.1489 | likely_benign | 0.1262 | benign | -1.643 | Destabilizing | 0.001 | N | 0.305 | neutral | None | None | None | None | N |
Y/T | 0.3031 | likely_benign | 0.2497 | benign | -1.475 | Destabilizing | 0.009 | N | 0.458 | neutral | None | None | None | None | N |
Y/V | 0.2875 | likely_benign | 0.2462 | benign | -1.557 | Destabilizing | None | N | 0.239 | neutral | None | None | None | None | N |
Y/W | 0.4106 | ambiguous | 0.3762 | ambiguous | -0.553 | Destabilizing | 0.245 | N | 0.464 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.