Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9345 | 28258;28259;28260 | chr2:178711203;178711202;178711201 | chr2:179575930;179575929;179575928 |
N2AB | 9028 | 27307;27308;27309 | chr2:178711203;178711202;178711201 | chr2:179575930;179575929;179575928 |
N2A | 8101 | 24526;24527;24528 | chr2:178711203;178711202;178711201 | chr2:179575930;179575929;179575928 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | None | None | 0.148 | 0.045 | 0.0482279557977 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0634 | likely_benign | 0.0596 | benign | -0.338 | Destabilizing | None | N | 0.148 | neutral | None | None | None | None | N |
P/C | 0.3311 | likely_benign | 0.3023 | benign | -0.682 | Destabilizing | 0.245 | N | 0.389 | neutral | None | None | None | None | N |
P/D | 0.1598 | likely_benign | 0.1696 | benign | -0.31 | Destabilizing | 0.009 | N | 0.317 | neutral | None | None | None | None | N |
P/E | 0.1315 | likely_benign | 0.1299 | benign | -0.425 | Destabilizing | None | N | 0.197 | neutral | None | None | None | None | N |
P/F | 0.2512 | likely_benign | 0.2139 | benign | -0.64 | Destabilizing | 0.022 | N | 0.477 | neutral | None | None | None | None | N |
P/G | 0.1597 | likely_benign | 0.1533 | benign | -0.43 | Destabilizing | None | N | 0.142 | neutral | None | None | None | None | N |
P/H | 0.0969 | likely_benign | 0.094 | benign | 0.012 | Stabilizing | 0.138 | N | 0.425 | neutral | None | None | None | None | N |
P/I | 0.1715 | likely_benign | 0.1487 | benign | -0.244 | Destabilizing | 0.009 | N | 0.381 | neutral | None | None | None | None | N |
P/K | 0.1409 | likely_benign | 0.1481 | benign | -0.385 | Destabilizing | 0.009 | N | 0.318 | neutral | None | None | None | None | N |
P/L | 0.0927 | likely_benign | 0.0823 | benign | -0.244 | Destabilizing | None | N | 0.209 | neutral | None | None | None | None | N |
P/M | 0.1972 | likely_benign | 0.1727 | benign | -0.457 | Destabilizing | 0.138 | N | 0.383 | neutral | None | None | None | None | N |
P/N | 0.1385 | likely_benign | 0.1324 | benign | -0.164 | Destabilizing | None | N | 0.192 | neutral | None | None | None | None | N |
P/Q | 0.0864 | likely_benign | 0.0828 | benign | -0.387 | Destabilizing | None | N | 0.253 | neutral | None | None | None | None | N |
P/R | 0.1022 | likely_benign | 0.1065 | benign | 0.102 | Stabilizing | 0.007 | N | 0.351 | neutral | None | None | None | None | N |
P/S | 0.0784 | likely_benign | 0.0721 | benign | -0.483 | Destabilizing | None | N | 0.154 | neutral | None | None | None | None | N |
P/T | 0.0772 | likely_benign | 0.0724 | benign | -0.502 | Destabilizing | None | N | 0.187 | neutral | None | None | None | None | N |
P/V | 0.1305 | likely_benign | 0.1169 | benign | -0.244 | Destabilizing | 0.004 | N | 0.26 | neutral | None | None | None | None | N |
P/W | 0.3276 | likely_benign | 0.3185 | benign | -0.715 | Destabilizing | 0.55 | D | 0.383 | neutral | None | None | None | None | N |
P/Y | 0.2045 | likely_benign | 0.1863 | benign | -0.425 | Destabilizing | None | N | 0.283 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.