Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9349 | 28270;28271;28272 | chr2:178711191;178711190;178711189 | chr2:179575918;179575917;179575916 |
N2AB | 9032 | 27319;27320;27321 | chr2:178711191;178711190;178711189 | chr2:179575918;179575917;179575916 |
N2A | 8105 | 24538;24539;24540 | chr2:178711191;178711190;178711189 | chr2:179575918;179575917;179575916 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | None | None | 0.116 | 0.111 | 0.198526703765 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
T/I | rs749966898 | 0.077 | None | None | 0.218 | 0.118 | 0.285698343383 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.86E-06 | 0 |
T/I | rs749966898 | 0.077 | None | None | 0.218 | 0.118 | 0.285698343383 | gnomAD-4.0.0 | 4.77332E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71634E-06 | 0 | 3.02352E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1042 | likely_benign | 0.1048 | benign | -1.239 | Destabilizing | None | N | 0.116 | neutral | None | None | None | None | N |
T/C | 0.5007 | ambiguous | 0.4327 | ambiguous | -0.703 | Destabilizing | 0.555 | D | 0.578 | neutral | None | None | None | None | N |
T/D | 0.6233 | likely_pathogenic | 0.6301 | pathogenic | -0.613 | Destabilizing | 0.38 | N | 0.588 | neutral | None | None | None | None | N |
T/E | 0.4573 | ambiguous | 0.4819 | ambiguous | -0.523 | Destabilizing | 0.149 | N | 0.557 | neutral | None | None | None | None | N |
T/F | 0.2601 | likely_benign | 0.2673 | benign | -1.187 | Destabilizing | 0.38 | N | 0.63 | neutral | None | None | None | None | N |
T/G | 0.3136 | likely_benign | 0.3086 | benign | -1.582 | Destabilizing | 0.081 | N | 0.563 | neutral | None | None | None | None | N |
T/H | 0.3156 | likely_benign | 0.3314 | benign | -1.801 | Destabilizing | 0.935 | D | 0.608 | neutral | None | None | None | None | N |
T/I | 0.1932 | likely_benign | 0.1976 | benign | -0.377 | Destabilizing | None | N | 0.218 | neutral | None | None | None | None | N |
T/K | 0.2624 | likely_benign | 0.2864 | benign | -0.706 | Destabilizing | 0.117 | N | 0.557 | neutral | None | None | None | None | N |
T/L | 0.1141 | likely_benign | 0.1265 | benign | -0.377 | Destabilizing | 0.005 | N | 0.329 | neutral | None | None | None | None | N |
T/M | 0.0907 | likely_benign | 0.0978 | benign | -0.058 | Destabilizing | 0.007 | N | 0.353 | neutral | None | None | None | None | N |
T/N | 0.1882 | likely_benign | 0.1937 | benign | -0.95 | Destabilizing | 0.555 | D | 0.534 | neutral | None | None | None | None | N |
T/P | 0.2717 | likely_benign | 0.3085 | benign | -0.632 | Destabilizing | 0.317 | N | 0.597 | neutral | None | None | None | None | N |
T/Q | 0.286 | likely_benign | 0.3171 | benign | -0.943 | Destabilizing | 0.555 | D | 0.596 | neutral | None | None | None | None | N |
T/R | 0.2083 | likely_benign | 0.2358 | benign | -0.672 | Destabilizing | 0.317 | N | 0.597 | neutral | None | None | None | None | N |
T/S | 0.1366 | likely_benign | 0.1384 | benign | -1.279 | Destabilizing | 0.027 | N | 0.466 | neutral | None | None | None | None | N |
T/V | 0.1629 | likely_benign | 0.163 | benign | -0.632 | Destabilizing | 0.005 | N | 0.296 | neutral | None | None | None | None | N |
T/W | 0.6378 | likely_pathogenic | 0.668 | pathogenic | -1.139 | Destabilizing | 0.935 | D | 0.628 | neutral | None | None | None | None | N |
T/Y | 0.2832 | likely_benign | 0.2964 | benign | -0.879 | Destabilizing | 0.555 | D | 0.619 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.