Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9351 | 28276;28277;28278 | chr2:178711185;178711184;178711183 | chr2:179575912;179575911;179575910 |
N2AB | 9034 | 27325;27326;27327 | chr2:178711185;178711184;178711183 | chr2:179575912;179575911;179575910 |
N2A | 8107 | 24544;24545;24546 | chr2:178711185;178711184;178711183 | chr2:179575912;179575911;179575910 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.008 | None | 0.308 | 0.261 | 0.232513804876 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8683 | likely_pathogenic | 0.9124 | pathogenic | -1.932 | Destabilizing | 0.775 | D | 0.688 | prob.neutral | None | None | None | None | N |
F/C | 0.6467 | likely_pathogenic | 0.7411 | pathogenic | -1.118 | Destabilizing | 0.995 | D | 0.745 | deleterious | None | None | None | None | N |
F/D | 0.9367 | likely_pathogenic | 0.9611 | pathogenic | -0.095 | Destabilizing | 0.961 | D | 0.758 | deleterious | None | None | None | None | N |
F/E | 0.9566 | likely_pathogenic | 0.9751 | pathogenic | -0.009 | Destabilizing | 0.961 | D | 0.758 | deleterious | None | None | None | None | N |
F/G | 0.9385 | likely_pathogenic | 0.9662 | pathogenic | -2.26 | Highly Destabilizing | 0.961 | D | 0.731 | prob.delet. | None | None | None | None | N |
F/H | 0.725 | likely_pathogenic | 0.7899 | pathogenic | -0.617 | Destabilizing | 0.923 | D | 0.687 | prob.neutral | None | None | None | None | N |
F/I | 0.3684 | ambiguous | 0.4292 | ambiguous | -0.965 | Destabilizing | 0.565 | D | 0.595 | neutral | None | None | None | None | N |
F/K | 0.9415 | likely_pathogenic | 0.9629 | pathogenic | -0.949 | Destabilizing | 0.923 | D | 0.754 | deleterious | None | None | None | None | N |
F/L | 0.898 | likely_pathogenic | 0.9275 | pathogenic | -0.965 | Destabilizing | 0.008 | N | 0.308 | neutral | None | None | None | None | N |
F/M | 0.7238 | likely_pathogenic | 0.7761 | pathogenic | -0.785 | Destabilizing | 0.923 | D | 0.641 | neutral | None | None | None | None | N |
F/N | 0.8268 | likely_pathogenic | 0.8844 | pathogenic | -0.963 | Destabilizing | 0.961 | D | 0.755 | deleterious | None | None | None | None | N |
F/P | 0.9939 | likely_pathogenic | 0.9975 | pathogenic | -1.278 | Destabilizing | 0.987 | D | 0.75 | deleterious | None | None | None | None | N |
F/Q | 0.911 | likely_pathogenic | 0.9433 | pathogenic | -0.982 | Destabilizing | 0.961 | D | 0.755 | deleterious | None | None | None | None | N |
F/R | 0.8753 | likely_pathogenic | 0.9133 | pathogenic | -0.406 | Destabilizing | 0.961 | D | 0.756 | deleterious | None | None | None | None | N |
F/S | 0.6975 | likely_pathogenic | 0.7779 | pathogenic | -1.859 | Destabilizing | 0.901 | D | 0.719 | prob.delet. | None | None | None | None | N |
F/T | 0.7925 | likely_pathogenic | 0.8485 | pathogenic | -1.675 | Destabilizing | 0.961 | D | 0.717 | prob.delet. | None | None | None | None | N |
F/V | 0.3824 | ambiguous | 0.4308 | ambiguous | -1.278 | Destabilizing | 0.565 | D | 0.638 | neutral | None | None | None | None | N |
F/W | 0.6462 | likely_pathogenic | 0.7513 | pathogenic | -0.22 | Destabilizing | 0.989 | D | 0.642 | neutral | None | None | None | None | N |
F/Y | 0.1685 | likely_benign | 0.2132 | benign | -0.405 | Destabilizing | 0.003 | N | 0.278 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.