Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9354 | 28285;28286;28287 | chr2:178711176;178711175;178711174 | chr2:179575903;179575902;179575901 |
N2AB | 9037 | 27334;27335;27336 | chr2:178711176;178711175;178711174 | chr2:179575903;179575902;179575901 |
N2A | 8110 | 24553;24554;24555 | chr2:178711176;178711175;178711174 | chr2:179575903;179575902;179575901 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.716 | None | 0.545 | 0.322 | 0.225902525712 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3442 | ambiguous | 0.4617 | ambiguous | -0.902 | Destabilizing | 0.769 | D | 0.675 | prob.neutral | None | None | None | None | N |
N/C | 0.4103 | ambiguous | 0.5212 | ambiguous | 0.062 | Stabilizing | 0.998 | D | 0.785 | deleterious | None | None | None | None | N |
N/D | 0.1612 | likely_benign | 0.2105 | benign | -0.086 | Destabilizing | 0.834 | D | 0.575 | neutral | None | None | None | None | N |
N/E | 0.4226 | ambiguous | 0.5552 | ambiguous | -0.025 | Destabilizing | 0.769 | D | 0.577 | neutral | None | None | None | None | N |
N/F | 0.6053 | likely_pathogenic | 0.7218 | pathogenic | -0.892 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | N |
N/G | 0.2395 | likely_benign | 0.3196 | benign | -1.197 | Destabilizing | 0.87 | D | 0.566 | neutral | None | None | None | None | N |
N/H | 0.0926 | likely_benign | 0.1205 | benign | -1.002 | Destabilizing | 0.973 | D | 0.733 | prob.delet. | None | None | None | None | N |
N/I | 0.4645 | ambiguous | 0.5973 | pathogenic | -0.172 | Destabilizing | 0.973 | D | 0.799 | deleterious | None | None | None | None | N |
N/K | 0.1964 | likely_benign | 0.3198 | benign | -0.055 | Destabilizing | 0.016 | N | 0.309 | neutral | None | None | None | None | N |
N/L | 0.3654 | ambiguous | 0.4794 | ambiguous | -0.172 | Destabilizing | 0.959 | D | 0.743 | deleterious | None | None | None | None | N |
N/M | 0.4455 | ambiguous | 0.563 | ambiguous | 0.281 | Stabilizing | 0.998 | D | 0.775 | deleterious | None | None | None | None | N |
N/P | 0.8114 | likely_pathogenic | 0.9045 | pathogenic | -0.386 | Destabilizing | 0.979 | D | 0.787 | deleterious | None | None | None | None | N |
N/Q | 0.2667 | likely_benign | 0.3751 | ambiguous | -0.625 | Destabilizing | 0.921 | D | 0.745 | deleterious | None | None | None | None | N |
N/R | 0.2119 | likely_benign | 0.3208 | benign | -0.074 | Destabilizing | 0.921 | D | 0.664 | neutral | None | None | None | None | N |
N/S | 0.1042 | likely_benign | 0.1241 | benign | -0.643 | Destabilizing | 0.716 | D | 0.545 | neutral | None | None | None | None | N |
N/T | 0.2253 | likely_benign | 0.2924 | benign | -0.384 | Destabilizing | 0.834 | D | 0.601 | neutral | None | None | None | None | N |
N/V | 0.474 | ambiguous | 0.6146 | pathogenic | -0.386 | Destabilizing | 0.959 | D | 0.783 | deleterious | None | None | None | None | N |
N/W | 0.7965 | likely_pathogenic | 0.8996 | pathogenic | -0.663 | Destabilizing | 0.998 | D | 0.768 | deleterious | None | None | None | None | N |
N/Y | 0.1908 | likely_benign | 0.2642 | benign | -0.457 | Destabilizing | 0.991 | D | 0.79 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.