Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC936728324;28325;28326 chr2:178711137;178711136;178711135chr2:179575864;179575863;179575862
N2AB905027373;27374;27375 chr2:178711137;178711136;178711135chr2:179575864;179575863;179575862
N2A812324592;24593;24594 chr2:178711137;178711136;178711135chr2:179575864;179575863;179575862
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Ig-79
  • Domain position: 67
  • Structural Position: 149
  • Q(SASA): 0.1217
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs748483786 -1.428 None None 0.418 0.078 0.352693368174 gnomAD-2.1.1 1.43E-05 None None None None N None 0 0 None 0 0 None 0 None 0 3.12E-05 0
L/F rs748483786 -1.428 None None 0.418 0.078 0.352693368174 gnomAD-3.1.2 2.63E-05 None None None None N None 0 0 0 0 0 None 0 0 5.88E-05 0 0
L/F rs748483786 -1.428 None None 0.418 0.078 0.352693368174 gnomAD-4.0.0 2.23083E-05 None None None None N None 0 1.66689E-05 None 0 0 None 0 1.64474E-04 2.79708E-05 0 1.60092E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.1885 likely_benign 0.2139 benign -1.845 Destabilizing 0.149 N 0.729 prob.delet. None None None None N
L/C 0.4263 ambiguous 0.4306 ambiguous -1.357 Destabilizing 0.935 D 0.809 deleterious None None None None N
L/D 0.38 ambiguous 0.4864 ambiguous -0.645 Destabilizing 0.555 D 0.867 deleterious None None None None N
L/E 0.2393 likely_benign 0.3157 benign -0.545 Destabilizing 0.38 N 0.857 deleterious None None None None N
L/F 0.0875 likely_benign 0.093 benign -1.093 Destabilizing None N 0.418 neutral None None None None N
L/G 0.4164 ambiguous 0.4964 ambiguous -2.258 Highly Destabilizing 0.555 D 0.847 deleterious None None None None N
L/H 0.095 likely_benign 0.1135 benign -1.276 Destabilizing None N 0.577 neutral None None None None N
L/I 0.1059 likely_benign 0.1125 benign -0.74 Destabilizing 0.062 N 0.671 neutral None None None None N
L/K 0.2525 likely_benign 0.3374 benign -1.165 Destabilizing 0.38 N 0.849 deleterious None None None None N
L/M 0.107 likely_benign 0.1044 benign -0.747 Destabilizing 0.555 D 0.711 prob.delet. None None None None N
L/N 0.2109 likely_benign 0.2671 benign -1.161 Destabilizing 0.38 N 0.858 deleterious None None None None N
L/P 0.6569 likely_pathogenic 0.8059 pathogenic -1.08 Destabilizing 0.741 D 0.882 deleterious None None None None N
L/Q 0.1054 likely_benign 0.1302 benign -1.142 Destabilizing 0.38 N 0.866 deleterious None None None None N
L/R 0.1787 likely_benign 0.2419 benign -0.763 Destabilizing 0.317 N 0.857 deleterious None None None None N
L/S 0.1592 likely_benign 0.1804 benign -1.984 Destabilizing 0.149 N 0.84 deleterious None None None None N
L/T 0.1689 likely_benign 0.1912 benign -1.73 Destabilizing 0.262 N 0.806 deleterious None None None None N
L/V 0.101 likely_benign 0.1064 benign -1.08 Destabilizing 0.062 N 0.66 neutral None None None None N
L/W 0.1446 likely_benign 0.1805 benign -1.141 Destabilizing 0.824 D 0.853 deleterious None None None None N
L/Y 0.1671 likely_benign 0.1884 benign -0.93 Destabilizing 0.081 N 0.777 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.