Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9378 | 28357;28358;28359 | chr2:178711104;178711103;178711102 | chr2:179575831;179575830;179575829 |
N2AB | 9061 | 27406;27407;27408 | chr2:178711104;178711103;178711102 | chr2:179575831;179575830;179575829 |
N2A | 8134 | 24625;24626;24627 | chr2:178711104;178711103;178711102 | chr2:179575831;179575830;179575829 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs879082824 | None | 0.01 | None | 0.081 | 0.162 | 0.159798565429 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
P/S | rs879082824 | None | 0.01 | None | 0.081 | 0.162 | 0.159798565429 | gnomAD-4.0.0 | 6.20008E-06 | None | None | None | None | I | None | 1.33526E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 7.63137E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0685 | likely_benign | 0.0751 | benign | -0.427 | Destabilizing | 0.002 | N | 0.09 | neutral | None | None | None | None | I |
P/C | 0.4672 | ambiguous | 0.5872 | pathogenic | -0.731 | Destabilizing | 0.944 | D | 0.255 | neutral | None | None | None | None | I |
P/D | 0.2174 | likely_benign | 0.3228 | benign | -0.4 | Destabilizing | 0.003 | N | 0.095 | neutral | None | None | None | None | I |
P/E | 0.164 | likely_benign | 0.2226 | benign | -0.516 | Destabilizing | 0.013 | N | 0.105 | neutral | None | None | None | None | I |
P/F | 0.2684 | likely_benign | 0.3661 | ambiguous | -0.694 | Destabilizing | 0.007 | N | 0.209 | neutral | None | None | None | None | I |
P/G | 0.2156 | likely_benign | 0.2772 | benign | -0.529 | Destabilizing | 0.003 | N | 0.097 | neutral | None | None | None | None | I |
P/H | 0.1186 | likely_benign | 0.1654 | benign | -0.069 | Destabilizing | 0.975 | D | 0.273 | neutral | None | None | None | None | I |
P/I | 0.1835 | likely_benign | 0.251 | benign | -0.307 | Destabilizing | 0.543 | D | 0.325 | neutral | None | None | None | None | I |
P/K | 0.1981 | likely_benign | 0.252 | benign | -0.475 | Destabilizing | 0.495 | N | 0.306 | neutral | None | None | None | None | I |
P/L | 0.1064 | likely_benign | 0.1362 | benign | -0.307 | Destabilizing | 0.27 | N | 0.326 | neutral | None | None | None | None | I |
P/M | 0.2243 | likely_benign | 0.2835 | benign | -0.47 | Destabilizing | 0.944 | D | 0.274 | neutral | None | None | None | None | I |
P/N | 0.1798 | likely_benign | 0.268 | benign | -0.27 | Destabilizing | 0.495 | N | 0.3 | neutral | None | None | None | None | I |
P/Q | 0.1152 | likely_benign | 0.1498 | benign | -0.506 | Destabilizing | 0.704 | D | 0.288 | neutral | None | None | None | None | I |
P/R | 0.1281 | likely_benign | 0.1568 | benign | 0.052 | Stabilizing | 0.642 | D | 0.32 | neutral | None | None | None | None | I |
P/S | 0.0874 | likely_benign | 0.1083 | benign | -0.587 | Destabilizing | 0.01 | N | 0.081 | neutral | None | None | None | None | I |
P/T | 0.0783 | likely_benign | 0.0965 | benign | -0.607 | Destabilizing | 0.27 | N | 0.273 | neutral | None | None | None | None | I |
P/V | 0.1428 | likely_benign | 0.181 | benign | -0.315 | Destabilizing | 0.329 | N | 0.277 | neutral | None | None | None | None | I |
P/W | 0.4557 | ambiguous | 0.5955 | pathogenic | -0.765 | Destabilizing | 0.995 | D | 0.257 | neutral | None | None | None | None | I |
P/Y | 0.2481 | likely_benign | 0.3506 | ambiguous | -0.481 | Destabilizing | 0.543 | D | 0.317 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.