Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9390 | 28393;28394;28395 | chr2:178711068;178711067;178711066 | chr2:179575795;179575794;179575793 |
N2AB | 9073 | 27442;27443;27444 | chr2:178711068;178711067;178711066 | chr2:179575795;179575794;179575793 |
N2A | 8146 | 24661;24662;24663 | chr2:178711068;178711067;178711066 | chr2:179575795;179575794;179575793 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.981 | None | 0.479 | 0.248 | 0.414798848334 | gnomAD-4.0.0 | 1.68155E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.57085E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6465 | likely_pathogenic | 0.6577 | pathogenic | -1.963 | Destabilizing | 0.997 | D | 0.535 | neutral | None | None | None | None | I |
L/C | 0.8283 | likely_pathogenic | 0.8474 | pathogenic | -1.204 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | I |
L/D | 0.9886 | likely_pathogenic | 0.9936 | pathogenic | -1.555 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
L/E | 0.9296 | likely_pathogenic | 0.9547 | pathogenic | -1.508 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
L/F | 0.5068 | ambiguous | 0.5572 | ambiguous | -1.333 | Destabilizing | 0.999 | D | 0.674 | neutral | None | None | None | None | I |
L/G | 0.9206 | likely_pathogenic | 0.936 | pathogenic | -2.341 | Highly Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
L/H | 0.8879 | likely_pathogenic | 0.9209 | pathogenic | -1.606 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
L/I | 0.1104 | likely_benign | 0.129 | benign | -0.965 | Destabilizing | 0.981 | D | 0.479 | neutral | None | None | None | None | I |
L/K | 0.9143 | likely_pathogenic | 0.9498 | pathogenic | -1.33 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | I |
L/M | 0.2612 | likely_benign | 0.2767 | benign | -0.771 | Destabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | I |
L/N | 0.919 | likely_pathogenic | 0.9416 | pathogenic | -1.197 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | I |
L/P | 0.8309 | likely_pathogenic | 0.8969 | pathogenic | -1.269 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
L/Q | 0.7768 | likely_pathogenic | 0.8387 | pathogenic | -1.339 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
L/R | 0.8402 | likely_pathogenic | 0.9005 | pathogenic | -0.79 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
L/S | 0.8519 | likely_pathogenic | 0.8734 | pathogenic | -1.856 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
L/T | 0.5925 | likely_pathogenic | 0.6375 | pathogenic | -1.691 | Destabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | I |
L/V | 0.116 | likely_benign | 0.1382 | benign | -1.269 | Destabilizing | 0.767 | D | 0.224 | neutral | None | None | None | None | I |
L/W | 0.8744 | likely_pathogenic | 0.9211 | pathogenic | -1.468 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | I |
L/Y | 0.901 | likely_pathogenic | 0.9261 | pathogenic | -1.233 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.