Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC940328432;28433;28434 chr2:178710890;178710889;178710888chr2:179575617;179575616;179575615
N2AB908627481;27482;27483 chr2:178710890;178710889;178710888chr2:179575617;179575616;179575615
N2A815924700;24701;24702 chr2:178710890;178710889;178710888chr2:179575617;179575616;179575615
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Ig-80
  • Domain position: 7
  • Structural Position: 8
  • Q(SASA): 0.1225
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/V rs752742472 -1.449 None None 0.435 0.082 0.0716867268079 gnomAD-2.1.1 8.06E-06 None None None None N None 0 0 None 0 0 None 6.54E-05 None 0 0 0
L/V rs752742472 -1.449 None None 0.435 0.082 0.0716867268079 gnomAD-4.0.0 2.73738E-06 None None None None N None 0 0 None 0 0 None 0 0 0 4.63811E-05 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.1405 likely_benign 0.1782 benign -2.362 Highly Destabilizing 0.035 N 0.579 neutral None None None None N
L/C 0.5637 ambiguous 0.6023 pathogenic -1.441 Destabilizing 0.824 D 0.633 neutral None None None None N
L/D 0.8854 likely_pathogenic 0.9279 pathogenic -2.108 Highly Destabilizing 0.38 N 0.73 prob.delet. None None None None N
L/E 0.6794 likely_pathogenic 0.7407 pathogenic -1.958 Destabilizing 0.38 N 0.723 prob.delet. None None None None N
L/F 0.3713 ambiguous 0.4448 ambiguous -1.414 Destabilizing 0.317 N 0.646 neutral None None None None N
L/G 0.5059 ambiguous 0.5963 pathogenic -2.852 Highly Destabilizing 0.38 N 0.725 prob.delet. None None None None N
L/H 0.6255 likely_pathogenic 0.7199 pathogenic -2.142 Highly Destabilizing 0.915 D 0.694 prob.neutral None None None None N
L/I 0.0913 likely_benign 0.1034 benign -0.985 Destabilizing None N 0.209 neutral None None None None N
L/K 0.6967 likely_pathogenic 0.7739 pathogenic -1.708 Destabilizing 0.38 N 0.685 prob.neutral None None None None N
L/M 0.1484 likely_benign 0.1791 benign -0.761 Destabilizing 0.38 N 0.57 neutral None None None None N
L/N 0.559 ambiguous 0.685 pathogenic -1.763 Destabilizing 0.38 N 0.732 prob.delet. None None None None N
L/P 0.0921 likely_benign 0.1123 benign -1.42 Destabilizing None N 0.556 neutral None None None None N
L/Q 0.4636 ambiguous 0.533 ambiguous -1.746 Destabilizing 0.555 D 0.654 neutral None None None None N
L/R 0.6249 likely_pathogenic 0.7004 pathogenic -1.295 Destabilizing 0.317 N 0.684 prob.neutral None None None None N
L/S 0.3743 ambiguous 0.4657 ambiguous -2.495 Highly Destabilizing 0.081 N 0.65 neutral None None None None N
L/T 0.1996 likely_benign 0.2411 benign -2.208 Highly Destabilizing 0.001 N 0.479 neutral None None None None N
L/V 0.0923 likely_benign 0.0928 benign -1.42 Destabilizing None N 0.435 neutral None None None None N
L/W 0.7063 likely_pathogenic 0.7535 pathogenic -1.685 Destabilizing 0.935 D 0.67 neutral None None None None N
L/Y 0.7477 likely_pathogenic 0.8156 pathogenic -1.434 Destabilizing 0.555 D 0.671 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.