Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9406 | 28441;28442;28443 | chr2:178710881;178710880;178710879 | chr2:179575608;179575607;179575606 |
N2AB | 9089 | 27490;27491;27492 | chr2:178710881;178710880;178710879 | chr2:179575608;179575607;179575606 |
N2A | 8162 | 24709;24710;24711 | chr2:178710881;178710880;178710879 | chr2:179575608;179575607;179575606 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs1280284347 | -0.286 | 0.009 | None | 0.334 | 0.135 | 0.31077124679 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/M | rs1280284347 | -0.286 | 0.009 | None | 0.334 | 0.135 | 0.31077124679 | gnomAD-4.0.0 | 1.59116E-06 | None | None | None | None | N | None | 5.65355E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.113 | likely_benign | 0.1451 | benign | -1.45 | Destabilizing | None | N | 0.154 | neutral | None | None | None | None | N |
V/C | 0.7079 | likely_pathogenic | 0.7455 | pathogenic | -0.896 | Destabilizing | 0.824 | D | 0.335 | neutral | None | None | None | None | N |
V/D | 0.3327 | likely_benign | 0.4346 | ambiguous | -1.18 | Destabilizing | 0.38 | N | 0.456 | neutral | None | None | None | None | N |
V/E | 0.2119 | likely_benign | 0.26 | benign | -1.16 | Destabilizing | 0.062 | N | 0.401 | neutral | None | None | None | None | N |
V/F | 0.1551 | likely_benign | 0.1671 | benign | -1.087 | Destabilizing | 0.235 | N | 0.366 | neutral | None | None | None | None | N |
V/G | 0.1699 | likely_benign | 0.2319 | benign | -1.795 | Destabilizing | 0.062 | N | 0.439 | neutral | None | None | None | None | N |
V/H | 0.4441 | ambiguous | 0.5265 | ambiguous | -1.394 | Destabilizing | 0.824 | D | 0.425 | neutral | None | None | None | None | N |
V/I | 0.0797 | likely_benign | 0.0827 | benign | -0.594 | Destabilizing | 0.035 | N | 0.377 | neutral | None | None | None | None | N |
V/K | 0.1831 | likely_benign | 0.2343 | benign | -1.167 | Destabilizing | 0.081 | N | 0.404 | neutral | None | None | None | None | N |
V/L | 0.1468 | likely_benign | 0.1667 | benign | -0.594 | Destabilizing | None | N | 0.084 | neutral | None | None | None | None | N |
V/M | 0.1091 | likely_benign | 0.1236 | benign | -0.446 | Destabilizing | 0.009 | N | 0.334 | neutral | None | None | None | None | N |
V/N | 0.2491 | likely_benign | 0.3249 | benign | -0.951 | Destabilizing | 0.555 | D | 0.452 | neutral | None | None | None | None | N |
V/P | 0.6872 | likely_pathogenic | 0.7579 | pathogenic | -0.844 | Destabilizing | 0.555 | D | 0.417 | neutral | None | None | None | None | N |
V/Q | 0.2056 | likely_benign | 0.2553 | benign | -1.076 | Destabilizing | 0.016 | N | 0.355 | neutral | None | None | None | None | N |
V/R | 0.1585 | likely_benign | 0.1914 | benign | -0.723 | Destabilizing | 0.38 | N | 0.453 | neutral | None | None | None | None | N |
V/S | 0.1659 | likely_benign | 0.2145 | benign | -1.495 | Destabilizing | 0.081 | N | 0.433 | neutral | None | None | None | None | N |
V/T | 0.1127 | likely_benign | 0.1353 | benign | -1.358 | Destabilizing | 0.149 | N | 0.297 | neutral | None | None | None | None | N |
V/W | 0.7106 | likely_pathogenic | 0.7553 | pathogenic | -1.318 | Destabilizing | 0.935 | D | 0.518 | neutral | None | None | None | None | N |
V/Y | 0.4971 | ambiguous | 0.5389 | ambiguous | -1.003 | Destabilizing | 0.555 | D | 0.365 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.