Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9412 | 28459;28460;28461 | chr2:178710863;178710862;178710861 | chr2:179575590;179575589;179575588 |
N2AB | 9095 | 27508;27509;27510 | chr2:178710863;178710862;178710861 | chr2:179575590;179575589;179575588 |
N2A | 8168 | 24727;24728;24729 | chr2:178710863;178710862;178710861 | chr2:179575590;179575589;179575588 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs766534072 | -0.641 | 0.549 | None | 0.395 | 0.2 | 0.280181792013 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/G | rs766534072 | -0.641 | 0.549 | None | 0.395 | 0.2 | 0.280181792013 | gnomAD-4.0.0 | 1.36834E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99436E-07 | 1.15937E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1339 | likely_benign | 0.1773 | benign | -0.453 | Destabilizing | 0.201 | N | 0.351 | neutral | None | None | None | None | N |
E/C | 0.7756 | likely_pathogenic | 0.8422 | pathogenic | -0.027 | Destabilizing | 0.992 | D | 0.464 | neutral | None | None | None | None | N |
E/D | 0.0762 | likely_benign | 0.093 | benign | -0.379 | Destabilizing | 0.001 | N | 0.147 | neutral | None | None | None | None | N |
E/F | 0.6106 | likely_pathogenic | 0.6739 | pathogenic | -0.299 | Destabilizing | 0.972 | D | 0.432 | neutral | None | None | None | None | N |
E/G | 0.1199 | likely_benign | 0.1696 | benign | -0.66 | Destabilizing | 0.549 | D | 0.395 | neutral | None | None | None | None | N |
E/H | 0.3245 | likely_benign | 0.4328 | ambiguous | -0.143 | Destabilizing | 0.972 | D | 0.305 | neutral | None | None | None | None | N |
E/I | 0.354 | ambiguous | 0.4434 | ambiguous | 0.063 | Stabilizing | 0.92 | D | 0.439 | neutral | None | None | None | None | N |
E/K | 0.1228 | likely_benign | 0.1587 | benign | 0.36 | Stabilizing | 0.549 | D | 0.417 | neutral | None | None | None | None | N |
E/L | 0.3493 | ambiguous | 0.4526 | ambiguous | 0.063 | Stabilizing | 0.92 | D | 0.413 | neutral | None | None | None | None | N |
E/M | 0.3868 | ambiguous | 0.4749 | ambiguous | 0.21 | Stabilizing | 0.992 | D | 0.407 | neutral | None | None | None | None | N |
E/N | 0.1408 | likely_benign | 0.1879 | benign | -0.021 | Destabilizing | 0.447 | N | 0.347 | neutral | None | None | None | None | N |
E/P | 0.7673 | likely_pathogenic | 0.8407 | pathogenic | -0.089 | Destabilizing | 0.92 | D | 0.325 | neutral | None | None | None | None | N |
E/Q | 0.1074 | likely_benign | 0.1471 | benign | 0.014 | Stabilizing | 0.549 | D | 0.411 | neutral | None | None | None | None | N |
E/R | 0.2019 | likely_benign | 0.2632 | benign | 0.524 | Stabilizing | 0.92 | D | 0.338 | neutral | None | None | None | None | N |
E/S | 0.1288 | likely_benign | 0.1741 | benign | -0.173 | Destabilizing | 0.059 | N | 0.254 | neutral | None | None | None | None | N |
E/T | 0.1853 | likely_benign | 0.2459 | benign | 0.001 | Stabilizing | 0.617 | D | 0.336 | neutral | None | None | None | None | N |
E/V | 0.2127 | likely_benign | 0.2714 | benign | -0.089 | Destabilizing | 0.896 | D | 0.39 | neutral | None | None | None | None | N |
E/W | 0.827 | likely_pathogenic | 0.8755 | pathogenic | -0.12 | Destabilizing | 0.992 | D | 0.579 | neutral | None | None | None | None | N |
E/Y | 0.4699 | ambiguous | 0.5399 | ambiguous | -0.044 | Destabilizing | 0.972 | D | 0.416 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.