Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9414 | 28465;28466;28467 | chr2:178710857;178710856;178710855 | chr2:179575584;179575583;179575582 |
N2AB | 9097 | 27514;27515;27516 | chr2:178710857;178710856;178710855 | chr2:179575584;179575583;179575582 |
N2A | 8170 | 24733;24734;24735 | chr2:178710857;178710856;178710855 | chr2:179575584;179575583;179575582 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.046 | None | 0.275 | 0.153 | 0.16115917748 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5507 | ambiguous | 0.5988 | pathogenic | -1.129 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | N |
A/D | 0.8712 | likely_pathogenic | 0.8803 | pathogenic | -0.9 | Destabilizing | 0.997 | D | 0.82 | deleterious | None | None | None | None | N |
A/E | 0.7778 | likely_pathogenic | 0.8009 | pathogenic | -0.893 | Destabilizing | 0.993 | D | 0.817 | deleterious | None | None | None | None | N |
A/F | 0.6411 | likely_pathogenic | 0.6553 | pathogenic | -0.972 | Destabilizing | 0.993 | D | 0.826 | deleterious | None | None | None | None | N |
A/G | 0.1856 | likely_benign | 0.2179 | benign | -1.23 | Destabilizing | 0.969 | D | 0.673 | neutral | None | None | None | None | N |
A/H | 0.8723 | likely_pathogenic | 0.901 | pathogenic | -1.356 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
A/I | 0.3143 | likely_benign | 0.3061 | benign | -0.231 | Destabilizing | 0.386 | N | 0.391 | neutral | None | None | None | None | N |
A/K | 0.8411 | likely_pathogenic | 0.8759 | pathogenic | -1.132 | Destabilizing | 0.993 | D | 0.82 | deleterious | None | None | None | None | N |
A/L | 0.3079 | likely_benign | 0.3345 | benign | -0.231 | Destabilizing | 0.807 | D | 0.58 | neutral | None | None | None | None | N |
A/M | 0.3611 | ambiguous | 0.3789 | ambiguous | -0.326 | Destabilizing | 0.993 | D | 0.797 | deleterious | None | None | None | None | N |
A/N | 0.784 | likely_pathogenic | 0.8171 | pathogenic | -0.933 | Destabilizing | 0.998 | D | 0.823 | deleterious | None | None | None | None | N |
A/P | 0.8811 | likely_pathogenic | 0.8941 | pathogenic | -0.418 | Destabilizing | 0.997 | D | 0.821 | deleterious | None | None | None | None | N |
A/Q | 0.7551 | likely_pathogenic | 0.8046 | pathogenic | -1.006 | Destabilizing | 0.998 | D | 0.804 | deleterious | None | None | None | None | N |
A/R | 0.7475 | likely_pathogenic | 0.7997 | pathogenic | -0.891 | Destabilizing | 0.998 | D | 0.819 | deleterious | None | None | None | None | N |
A/S | 0.1875 | likely_benign | 0.2054 | benign | -1.393 | Destabilizing | 0.969 | D | 0.675 | neutral | None | None | None | None | N |
A/T | 0.1262 | likely_benign | 0.1278 | benign | -1.261 | Destabilizing | 0.939 | D | 0.68 | prob.neutral | None | None | None | None | N |
A/V | 0.133 | likely_benign | 0.1344 | benign | -0.418 | Destabilizing | 0.046 | N | 0.275 | neutral | None | None | None | None | N |
A/W | 0.9287 | likely_pathogenic | 0.9401 | pathogenic | -1.316 | Destabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | N |
A/Y | 0.8416 | likely_pathogenic | 0.8587 | pathogenic | -0.885 | Destabilizing | 0.998 | D | 0.821 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.