Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9415 | 28468;28469;28470 | chr2:178710854;178710853;178710852 | chr2:179575581;179575580;179575579 |
N2AB | 9098 | 27517;27518;27519 | chr2:178710854;178710853;178710852 | chr2:179575581;179575580;179575579 |
N2A | 8171 | 24736;24737;24738 | chr2:178710854;178710853;178710852 | chr2:179575581;179575580;179575579 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs2076551495 | None | 0.003 | None | 0.248 | 0.129 | 0.130388298395 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/E | rs2076551495 | None | 0.003 | None | 0.248 | 0.129 | 0.130388298395 | gnomAD-4.0.0 | 1.59109E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85799E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1196 | likely_benign | 0.1494 | benign | -0.371 | Destabilizing | 0.007 | N | 0.46 | neutral | None | None | None | None | I |
D/C | 0.5374 | ambiguous | 0.5935 | pathogenic | -0.086 | Destabilizing | 0.983 | D | 0.583 | neutral | None | None | None | None | I |
D/E | 0.1472 | likely_benign | 0.1798 | benign | -0.316 | Destabilizing | 0.003 | N | 0.248 | neutral | None | None | None | None | I |
D/F | 0.4509 | ambiguous | 0.5177 | ambiguous | 0.013 | Stabilizing | 0.94 | D | 0.585 | neutral | None | None | None | None | I |
D/G | 0.1535 | likely_benign | 0.1923 | benign | -0.639 | Destabilizing | 0.001 | N | 0.337 | neutral | None | None | None | None | I |
D/H | 0.16 | likely_benign | 0.2136 | benign | 0.091 | Stabilizing | 0.921 | D | 0.577 | neutral | None | None | None | None | I |
D/I | 0.2187 | likely_benign | 0.2534 | benign | 0.309 | Stabilizing | 0.836 | D | 0.591 | neutral | None | None | None | None | I |
D/K | 0.1951 | likely_benign | 0.2548 | benign | 0.267 | Stabilizing | 0.002 | N | 0.359 | neutral | None | None | None | None | I |
D/L | 0.2493 | likely_benign | 0.3093 | benign | 0.309 | Stabilizing | 0.418 | N | 0.557 | neutral | None | None | None | None | I |
D/M | 0.4661 | ambiguous | 0.5443 | ambiguous | 0.462 | Stabilizing | 0.983 | D | 0.577 | neutral | None | None | None | None | I |
D/N | 0.0782 | likely_benign | 0.0966 | benign | -0.292 | Destabilizing | 0.351 | N | 0.497 | neutral | None | None | None | None | I |
D/P | 0.6646 | likely_pathogenic | 0.752 | pathogenic | 0.106 | Stabilizing | 0.593 | D | 0.578 | neutral | None | None | None | None | I |
D/Q | 0.192 | likely_benign | 0.261 | benign | -0.179 | Destabilizing | 0.418 | N | 0.515 | neutral | None | None | None | None | I |
D/R | 0.1918 | likely_benign | 0.2643 | benign | 0.481 | Stabilizing | 0.264 | N | 0.569 | neutral | None | None | None | None | I |
D/S | 0.0873 | likely_benign | 0.1097 | benign | -0.402 | Destabilizing | 0.027 | N | 0.265 | neutral | None | None | None | None | I |
D/T | 0.1493 | likely_benign | 0.1883 | benign | -0.171 | Destabilizing | 0.418 | N | 0.487 | neutral | None | None | None | None | I |
D/V | 0.13 | likely_benign | 0.1512 | benign | 0.106 | Stabilizing | 0.351 | N | 0.562 | neutral | None | None | None | None | I |
D/W | 0.7925 | likely_pathogenic | 0.8482 | pathogenic | 0.244 | Stabilizing | 0.983 | D | 0.613 | neutral | None | None | None | None | I |
D/Y | 0.1687 | likely_benign | 0.1988 | benign | 0.283 | Stabilizing | 0.921 | D | 0.583 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.