Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9417 | 28474;28475;28476 | chr2:178710848;178710847;178710846 | chr2:179575575;179575574;179575573 |
N2AB | 9100 | 27523;27524;27525 | chr2:178710848;178710847;178710846 | chr2:179575575;179575574;179575573 |
N2A | 8173 | 24742;24743;24744 | chr2:178710848;178710847;178710846 | chr2:179575575;179575574;179575573 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs773169301 | -0.89 | 0.998 | None | 0.47 | 0.287 | 0.293147016451 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.11309E-04 | None | 0 | None | 0 | 0 | 0 |
E/D | rs773169301 | -0.89 | 0.998 | None | 0.47 | 0.287 | 0.293147016451 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 3.85356E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs773169301 | -0.89 | 0.998 | None | 0.47 | 0.287 | 0.293147016451 | gnomAD-4.0.0 | 3.09838E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.11388E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1564 | likely_benign | 0.2091 | benign | -0.831 | Destabilizing | 0.996 | D | 0.614 | neutral | None | None | None | None | I |
E/C | 0.8228 | likely_pathogenic | 0.9113 | pathogenic | -0.453 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
E/D | 0.2077 | likely_benign | 0.2957 | benign | -1.097 | Destabilizing | 0.998 | D | 0.47 | neutral | None | None | None | None | I |
E/F | 0.6297 | likely_pathogenic | 0.7856 | pathogenic | -0.4 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
E/G | 0.2365 | likely_benign | 0.3377 | benign | -1.189 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | I |
E/H | 0.3217 | likely_benign | 0.5399 | ambiguous | -0.786 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | I |
E/I | 0.27 | likely_benign | 0.3943 | ambiguous | 0.142 | Stabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
E/K | 0.1171 | likely_benign | 0.2077 | benign | -0.798 | Destabilizing | 0.992 | D | 0.524 | neutral | None | None | None | None | I |
E/L | 0.3367 | likely_benign | 0.4979 | ambiguous | 0.142 | Stabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
E/M | 0.3996 | ambiguous | 0.5465 | ambiguous | 0.62 | Stabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | I |
E/N | 0.3035 | likely_benign | 0.4543 | ambiguous | -1.147 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
E/P | 0.8973 | likely_pathogenic | 0.9433 | pathogenic | -0.161 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | I |
E/Q | 0.0967 | likely_benign | 0.1541 | benign | -0.998 | Destabilizing | 0.957 | D | 0.354 | neutral | None | None | None | None | I |
E/R | 0.172 | likely_benign | 0.3145 | benign | -0.564 | Destabilizing | 0.999 | D | 0.716 | prob.delet. | None | None | None | None | I |
E/S | 0.1749 | likely_benign | 0.2556 | benign | -1.458 | Destabilizing | 0.997 | D | 0.595 | neutral | None | None | None | None | I |
E/T | 0.1703 | likely_benign | 0.243 | benign | -1.17 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
E/V | 0.183 | likely_benign | 0.2434 | benign | -0.161 | Destabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | I |
E/W | 0.8399 | likely_pathogenic | 0.9363 | pathogenic | -0.225 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
E/Y | 0.5479 | ambiguous | 0.7454 | pathogenic | -0.193 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.