Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9419 | 28480;28481;28482 | chr2:178710842;178710841;178710840 | chr2:179575569;179575568;179575567 |
N2AB | 9102 | 27529;27530;27531 | chr2:178710842;178710841;178710840 | chr2:179575569;179575568;179575567 |
N2A | 8175 | 24748;24749;24750 | chr2:178710842;178710841;178710840 | chr2:179575569;179575568;179575567 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | rs762212243 | -0.398 | 0.999 | None | 0.528 | 0.308 | 0.199424873507 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
H/Q | rs762212243 | -0.398 | 0.999 | None | 0.528 | 0.308 | 0.199424873507 | gnomAD-4.0.0 | 6.84175E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15934E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.7324 | likely_pathogenic | 0.7886 | pathogenic | -0.883 | Destabilizing | 0.293 | N | 0.355 | neutral | None | None | None | None | N |
H/C | 0.4711 | ambiguous | 0.5802 | pathogenic | -0.299 | Destabilizing | 1.0 | D | 0.581 | neutral | None | None | None | None | N |
H/D | 0.6865 | likely_pathogenic | 0.7398 | pathogenic | -0.672 | Destabilizing | 0.979 | D | 0.52 | neutral | None | None | None | None | N |
H/E | 0.6795 | likely_pathogenic | 0.7552 | pathogenic | -0.599 | Destabilizing | 0.984 | D | 0.424 | neutral | None | None | None | None | N |
H/F | 0.584 | likely_pathogenic | 0.6723 | pathogenic | -0.115 | Destabilizing | 0.999 | D | 0.562 | neutral | None | None | None | None | N |
H/G | 0.7969 | likely_pathogenic | 0.8294 | pathogenic | -1.204 | Destabilizing | 0.039 | N | 0.348 | neutral | None | None | None | None | N |
H/I | 0.7235 | likely_pathogenic | 0.7898 | pathogenic | -0.01 | Destabilizing | 0.995 | D | 0.581 | neutral | None | None | None | None | N |
H/K | 0.465 | ambiguous | 0.5656 | pathogenic | -0.809 | Destabilizing | 0.984 | D | 0.507 | neutral | None | None | None | None | N |
H/L | 0.3367 | likely_benign | 0.3759 | ambiguous | -0.01 | Destabilizing | 0.959 | D | 0.557 | neutral | None | None | None | None | N |
H/M | 0.8132 | likely_pathogenic | 0.8617 | pathogenic | -0.089 | Destabilizing | 1.0 | D | 0.561 | neutral | None | None | None | None | N |
H/N | 0.3456 | ambiguous | 0.3881 | ambiguous | -0.744 | Destabilizing | 0.979 | D | 0.48 | neutral | None | None | None | None | N |
H/P | 0.8703 | likely_pathogenic | 0.8082 | pathogenic | -0.281 | Destabilizing | 0.998 | D | 0.572 | neutral | None | None | None | None | N |
H/Q | 0.4223 | ambiguous | 0.4997 | ambiguous | -0.569 | Destabilizing | 0.999 | D | 0.528 | neutral | None | None | None | None | N |
H/R | 0.158 | likely_benign | 0.1936 | benign | -1.024 | Destabilizing | 0.994 | D | 0.499 | neutral | None | None | None | None | N |
H/S | 0.5992 | likely_pathogenic | 0.6634 | pathogenic | -0.862 | Destabilizing | 0.939 | D | 0.448 | neutral | None | None | None | None | N |
H/T | 0.6925 | likely_pathogenic | 0.7584 | pathogenic | -0.698 | Destabilizing | 0.969 | D | 0.563 | neutral | None | None | None | None | N |
H/V | 0.6463 | likely_pathogenic | 0.7163 | pathogenic | -0.281 | Destabilizing | 0.969 | D | 0.572 | neutral | None | None | None | None | N |
H/W | 0.6222 | likely_pathogenic | 0.7019 | pathogenic | 0.042 | Stabilizing | 1.0 | D | 0.581 | neutral | None | None | None | None | N |
H/Y | 0.2358 | likely_benign | 0.288 | benign | 0.307 | Stabilizing | 0.998 | D | 0.501 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.