Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9423 | 28492;28493;28494 | chr2:178710830;178710829;178710828 | chr2:179575557;179575556;179575555 |
N2AB | 9106 | 27541;27542;27543 | chr2:178710830;178710829;178710828 | chr2:179575557;179575556;179575555 |
N2A | 8179 | 24760;24761;24762 | chr2:178710830;178710829;178710828 | chr2:179575557;179575556;179575555 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.669 | None | 0.443 | 0.355 | 0.508398094826 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1205 | likely_benign | 0.1671 | benign | -0.342 | Destabilizing | 0.454 | N | 0.334 | neutral | None | None | None | None | I |
T/C | 0.6839 | likely_pathogenic | 0.8147 | pathogenic | -0.3 | Destabilizing | 0.998 | D | 0.419 | neutral | None | None | None | None | I |
T/D | 0.5136 | ambiguous | 0.6311 | pathogenic | 0.074 | Stabilizing | 0.842 | D | 0.443 | neutral | None | None | None | None | I |
T/E | 0.4737 | ambiguous | 0.5776 | pathogenic | 0.027 | Stabilizing | 0.842 | D | 0.441 | neutral | None | None | None | None | I |
T/F | 0.33 | likely_benign | 0.4665 | ambiguous | -0.638 | Destabilizing | 0.949 | D | 0.562 | neutral | None | None | None | None | I |
T/G | 0.3423 | ambiguous | 0.4521 | ambiguous | -0.524 | Destabilizing | 0.728 | D | 0.511 | neutral | None | None | None | None | I |
T/H | 0.4204 | ambiguous | 0.5225 | ambiguous | -0.768 | Destabilizing | 0.998 | D | 0.541 | neutral | None | None | None | None | I |
T/I | 0.3361 | likely_benign | 0.5059 | ambiguous | 0.026 | Stabilizing | 0.669 | D | 0.443 | neutral | None | None | None | None | I |
T/K | 0.3891 | ambiguous | 0.5109 | ambiguous | -0.528 | Destabilizing | 0.801 | D | 0.418 | neutral | None | None | None | None | I |
T/L | 0.1837 | likely_benign | 0.2631 | benign | 0.026 | Stabilizing | 0.016 | N | 0.301 | neutral | None | None | None | None | I |
T/M | 0.1427 | likely_benign | 0.1746 | benign | 0.052 | Stabilizing | 0.949 | D | 0.423 | neutral | None | None | None | None | I |
T/N | 0.1678 | likely_benign | 0.2348 | benign | -0.302 | Destabilizing | 0.842 | D | 0.383 | neutral | None | None | None | None | I |
T/P | 0.2656 | likely_benign | 0.3816 | ambiguous | -0.066 | Destabilizing | 0.966 | D | 0.428 | neutral | None | None | None | None | I |
T/Q | 0.3571 | ambiguous | 0.4506 | ambiguous | -0.472 | Destabilizing | 0.974 | D | 0.436 | neutral | None | None | None | None | I |
T/R | 0.3005 | likely_benign | 0.3944 | ambiguous | -0.263 | Destabilizing | 0.934 | D | 0.433 | neutral | None | None | None | None | I |
T/S | 0.1108 | likely_benign | 0.1267 | benign | -0.507 | Destabilizing | 0.022 | N | 0.191 | neutral | None | None | None | None | I |
T/V | 0.2608 | likely_benign | 0.3985 | ambiguous | -0.066 | Destabilizing | 0.728 | D | 0.314 | neutral | None | None | None | None | I |
T/W | 0.713 | likely_pathogenic | 0.7884 | pathogenic | -0.663 | Destabilizing | 0.998 | D | 0.591 | neutral | None | None | None | None | I |
T/Y | 0.4124 | ambiguous | 0.5569 | ambiguous | -0.396 | Destabilizing | 0.991 | D | 0.553 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.