Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9432 | 28519;28520;28521 | chr2:178710803;178710802;178710801 | chr2:179575530;179575529;179575528 |
N2AB | 9115 | 27568;27569;27570 | chr2:178710803;178710802;178710801 | chr2:179575530;179575529;179575528 |
N2A | 8188 | 24787;24788;24789 | chr2:178710803;178710802;178710801 | chr2:179575530;179575529;179575528 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | 1.0 | None | 0.771 | 0.481 | 0.432716982437 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.903 | likely_pathogenic | 0.9467 | pathogenic | -1.183 | Destabilizing | 0.999 | D | 0.714 | prob.delet. | None | None | None | None | N |
K/C | 0.9592 | likely_pathogenic | 0.9704 | pathogenic | -1.24 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
K/D | 0.9889 | likely_pathogenic | 0.9942 | pathogenic | -0.911 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
K/E | 0.8022 | likely_pathogenic | 0.8903 | pathogenic | -0.703 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
K/F | 0.9728 | likely_pathogenic | 0.9778 | pathogenic | -0.781 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
K/G | 0.954 | likely_pathogenic | 0.9711 | pathogenic | -1.628 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
K/H | 0.7621 | likely_pathogenic | 0.8343 | pathogenic | -1.966 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
K/I | 0.8464 | likely_pathogenic | 0.8958 | pathogenic | 0.03 | Stabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
K/L | 0.817 | likely_pathogenic | 0.8649 | pathogenic | 0.03 | Stabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
K/M | 0.6936 | likely_pathogenic | 0.7859 | pathogenic | -0.062 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
K/N | 0.9527 | likely_pathogenic | 0.9713 | pathogenic | -1.214 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
K/P | 0.9953 | likely_pathogenic | 0.9962 | pathogenic | -0.348 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
K/Q | 0.5409 | ambiguous | 0.6723 | pathogenic | -1.104 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
K/R | 0.1118 | likely_benign | 0.1227 | benign | -0.949 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
K/S | 0.9467 | likely_pathogenic | 0.9727 | pathogenic | -1.908 | Destabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | N |
K/T | 0.8528 | likely_pathogenic | 0.9222 | pathogenic | -1.446 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
K/V | 0.7892 | likely_pathogenic | 0.8574 | pathogenic | -0.348 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
K/W | 0.968 | likely_pathogenic | 0.975 | pathogenic | -0.688 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
K/Y | 0.9409 | likely_pathogenic | 0.9535 | pathogenic | -0.352 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.