Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9435 | 28528;28529;28530 | chr2:178710794;178710793;178710792 | chr2:179575521;179575520;179575519 |
N2AB | 9118 | 27577;27578;27579 | chr2:178710794;178710793;178710792 | chr2:179575521;179575520;179575519 |
N2A | 8191 | 24796;24797;24798 | chr2:178710794;178710793;178710792 | chr2:179575521;179575520;179575519 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | rs1355846496 | -0.825 | 0.081 | None | 0.302 | 0.211 | 0.42526943336 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
R/G | rs1355846496 | -0.825 | 0.081 | None | 0.302 | 0.211 | 0.42526943336 | gnomAD-4.0.0 | 1.59099E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.3258 | likely_benign | 0.345 | ambiguous | 0.002 | Stabilizing | 0.025 | N | 0.283 | neutral | None | None | None | None | N |
R/C | 0.3191 | likely_benign | 0.3174 | benign | -0.157 | Destabilizing | 0.958 | D | 0.257 | neutral | None | None | None | None | N |
R/D | 0.6384 | likely_pathogenic | 0.6521 | pathogenic | -0.196 | Destabilizing | 0.22 | N | 0.321 | neutral | None | None | None | None | N |
R/E | 0.3196 | likely_benign | 0.3097 | benign | -0.148 | Destabilizing | 0.025 | N | 0.195 | neutral | None | None | None | None | N |
R/F | 0.5533 | ambiguous | 0.5915 | pathogenic | -0.274 | Destabilizing | 0.667 | D | 0.333 | neutral | None | None | None | None | N |
R/G | 0.2252 | likely_benign | 0.2357 | benign | -0.164 | Destabilizing | 0.081 | N | 0.302 | neutral | None | None | None | None | N |
R/H | 0.1196 | likely_benign | 0.1334 | benign | -0.656 | Destabilizing | 0.001 | N | 0.245 | neutral | None | None | None | None | N |
R/I | 0.2479 | likely_benign | 0.2556 | benign | 0.401 | Stabilizing | 0.003 | N | 0.289 | neutral | None | None | None | None | N |
R/K | 0.0769 | likely_benign | 0.0795 | benign | -0.114 | Destabilizing | None | N | 0.151 | neutral | None | None | None | None | N |
R/L | 0.2293 | likely_benign | 0.2601 | benign | 0.401 | Stabilizing | 0.055 | N | 0.301 | neutral | None | None | None | None | N |
R/M | 0.2387 | likely_benign | 0.248 | benign | 0.02 | Stabilizing | 0.667 | D | 0.292 | neutral | None | None | None | None | N |
R/N | 0.4634 | ambiguous | 0.5012 | ambiguous | 0.081 | Stabilizing | 0.104 | N | 0.181 | neutral | None | None | None | None | N |
R/P | 0.8197 | likely_pathogenic | 0.8609 | pathogenic | 0.287 | Stabilizing | 0.364 | N | 0.377 | neutral | None | None | None | None | N |
R/Q | 0.0965 | likely_benign | 0.0999 | benign | -0.01 | Destabilizing | 0.004 | N | 0.203 | neutral | None | None | None | None | N |
R/S | 0.3931 | ambiguous | 0.403 | ambiguous | -0.194 | Destabilizing | 0.042 | N | 0.293 | neutral | None | None | None | None | N |
R/T | 0.1898 | likely_benign | 0.1885 | benign | -0.028 | Destabilizing | 0.081 | N | 0.298 | neutral | None | None | None | None | N |
R/V | 0.309 | likely_benign | 0.3182 | benign | 0.287 | Stabilizing | 0.055 | N | 0.304 | neutral | None | None | None | None | N |
R/W | 0.1972 | likely_benign | 0.22 | benign | -0.384 | Destabilizing | 0.958 | D | 0.263 | neutral | None | None | None | None | N |
R/Y | 0.4778 | ambiguous | 0.5099 | ambiguous | 0.025 | Stabilizing | 0.22 | N | 0.352 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.