Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9436 | 28531;28532;28533 | chr2:178710791;178710790;178710789 | chr2:179575518;179575517;179575516 |
N2AB | 9119 | 27580;27581;27582 | chr2:178710791;178710790;178710789 | chr2:179575518;179575517;179575516 |
N2A | 8192 | 24799;24800;24801 | chr2:178710791;178710790;178710789 | chr2:179575518;179575517;179575516 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs906433178 | None | 0.003 | None | 0.145 | 0.099 | 0.270447802918 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 1.30907E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs906433178 | None | 0.003 | None | 0.145 | 0.099 | 0.270447802918 | gnomAD-4.0.0 | 1.85895E-06 | None | None | None | None | N | None | 0 | 5.0005E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | None | None | 0.034 | None | 0.249 | 0.127 | 0.251639045875 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.213 | likely_benign | 0.2701 | benign | -0.334 | Destabilizing | 0.565 | D | 0.494 | neutral | None | None | None | None | N |
E/C | 0.936 | likely_pathogenic | 0.9669 | pathogenic | -0.114 | Destabilizing | 0.996 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/D | 0.1305 | likely_benign | 0.1686 | benign | -0.442 | Destabilizing | 0.003 | N | 0.145 | neutral | None | None | None | None | N |
E/F | 0.8026 | likely_pathogenic | 0.8925 | pathogenic | -0.169 | Destabilizing | 0.987 | D | 0.669 | neutral | None | None | None | None | N |
E/G | 0.2666 | likely_benign | 0.3685 | ambiguous | -0.532 | Destabilizing | 0.722 | D | 0.541 | neutral | None | None | None | None | N |
E/H | 0.6227 | likely_pathogenic | 0.7765 | pathogenic | 0.138 | Stabilizing | 0.961 | D | 0.504 | neutral | None | None | None | None | N |
E/I | 0.4384 | ambiguous | 0.5342 | ambiguous | 0.154 | Stabilizing | 0.961 | D | 0.669 | neutral | None | None | None | None | N |
E/K | 0.2858 | likely_benign | 0.355 | ambiguous | 0.361 | Stabilizing | 0.565 | D | 0.479 | neutral | None | None | None | None | N |
E/L | 0.4716 | ambiguous | 0.5638 | ambiguous | 0.154 | Stabilizing | 0.923 | D | 0.579 | neutral | None | None | None | None | N |
E/M | 0.5532 | ambiguous | 0.6582 | pathogenic | 0.144 | Stabilizing | 0.989 | D | 0.65 | neutral | None | None | None | None | N |
E/N | 0.3145 | likely_benign | 0.4405 | ambiguous | -0.059 | Destabilizing | 0.775 | D | 0.469 | neutral | None | None | None | None | N |
E/P | 0.3846 | ambiguous | 0.4618 | ambiguous | 0.012 | Stabilizing | 0.961 | D | 0.552 | neutral | None | None | None | None | N |
E/Q | 0.2094 | likely_benign | 0.2932 | benign | -0.016 | Destabilizing | 0.034 | N | 0.249 | neutral | None | None | None | None | N |
E/R | 0.4332 | ambiguous | 0.5615 | ambiguous | 0.596 | Stabilizing | 0.858 | D | 0.462 | neutral | None | None | None | None | N |
E/S | 0.3174 | likely_benign | 0.443 | ambiguous | -0.178 | Destabilizing | 0.633 | D | 0.443 | neutral | None | None | None | None | N |
E/T | 0.325 | likely_benign | 0.4306 | ambiguous | -0.013 | Destabilizing | 0.775 | D | 0.535 | neutral | None | None | None | None | N |
E/V | 0.2654 | likely_benign | 0.3305 | benign | 0.012 | Stabilizing | 0.901 | D | 0.566 | neutral | None | None | None | None | N |
E/W | 0.9265 | likely_pathogenic | 0.9666 | pathogenic | -0.011 | Destabilizing | 0.996 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/Y | 0.7042 | likely_pathogenic | 0.834 | pathogenic | 0.08 | Stabilizing | 0.961 | D | 0.654 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.