Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9437 | 28534;28535;28536 | chr2:178710788;178710787;178710786 | chr2:179575515;179575514;179575513 |
N2AB | 9120 | 27583;27584;27585 | chr2:178710788;178710787;178710786 | chr2:179575515;179575514;179575513 |
N2A | 8193 | 24802;24803;24804 | chr2:178710788;178710787;178710786 | chr2:179575515;179575514;179575513 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1277389231 | -2.713 | 0.801 | None | 0.491 | 0.499 | 0.760622118178 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.65289E-04 |
I/T | rs1277389231 | -2.713 | 0.801 | None | 0.491 | 0.499 | 0.760622118178 | gnomAD-4.0.0 | 1.59098E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02334E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9018 | likely_pathogenic | 0.9472 | pathogenic | -2.303 | Highly Destabilizing | 0.067 | N | 0.308 | neutral | None | None | None | None | N |
I/C | 0.9676 | likely_pathogenic | 0.9812 | pathogenic | -1.554 | Destabilizing | 0.998 | D | 0.524 | neutral | None | None | None | None | N |
I/D | 0.9908 | likely_pathogenic | 0.9956 | pathogenic | -2.34 | Highly Destabilizing | 0.974 | D | 0.609 | neutral | None | None | None | None | N |
I/E | 0.9742 | likely_pathogenic | 0.9842 | pathogenic | -2.124 | Highly Destabilizing | 0.974 | D | 0.585 | neutral | None | None | None | None | N |
I/F | 0.4703 | ambiguous | 0.5914 | pathogenic | -1.421 | Destabilizing | 0.949 | D | 0.491 | neutral | None | None | None | None | N |
I/G | 0.9676 | likely_pathogenic | 0.9843 | pathogenic | -2.815 | Highly Destabilizing | 0.949 | D | 0.559 | neutral | None | None | None | None | N |
I/H | 0.9738 | likely_pathogenic | 0.9854 | pathogenic | -2.116 | Highly Destabilizing | 0.998 | D | 0.609 | neutral | None | None | None | None | N |
I/K | 0.9445 | likely_pathogenic | 0.9645 | pathogenic | -1.722 | Destabilizing | 0.966 | D | 0.58 | neutral | None | None | None | None | N |
I/L | 0.1733 | likely_benign | 0.1789 | benign | -0.835 | Destabilizing | 0.005 | N | 0.173 | neutral | None | None | None | None | N |
I/M | 0.2201 | likely_benign | 0.2506 | benign | -0.767 | Destabilizing | 0.934 | D | 0.515 | neutral | None | None | None | None | N |
I/N | 0.9007 | likely_pathogenic | 0.9403 | pathogenic | -2.021 | Highly Destabilizing | 0.991 | D | 0.632 | neutral | None | None | None | None | N |
I/P | 0.972 | likely_pathogenic | 0.9862 | pathogenic | -1.304 | Destabilizing | 0.974 | D | 0.617 | neutral | None | None | None | None | N |
I/Q | 0.9546 | likely_pathogenic | 0.9737 | pathogenic | -1.893 | Destabilizing | 0.991 | D | 0.628 | neutral | None | None | None | None | N |
I/R | 0.9288 | likely_pathogenic | 0.9556 | pathogenic | -1.485 | Destabilizing | 0.966 | D | 0.633 | neutral | None | None | None | None | N |
I/S | 0.9299 | likely_pathogenic | 0.9624 | pathogenic | -2.715 | Highly Destabilizing | 0.728 | D | 0.514 | neutral | None | None | None | None | N |
I/T | 0.9083 | likely_pathogenic | 0.9444 | pathogenic | -2.342 | Highly Destabilizing | 0.801 | D | 0.491 | neutral | None | None | None | None | N |
I/V | 0.2065 | likely_benign | 0.2393 | benign | -1.304 | Destabilizing | 0.012 | N | 0.187 | neutral | None | None | None | None | N |
I/W | 0.967 | likely_pathogenic | 0.98 | pathogenic | -1.691 | Destabilizing | 0.998 | D | 0.639 | neutral | None | None | None | None | N |
I/Y | 0.8766 | likely_pathogenic | 0.9289 | pathogenic | -1.393 | Destabilizing | 0.974 | D | 0.572 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.