Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9446 | 28561;28562;28563 | chr2:178710761;178710760;178710759 | chr2:179575488;179575487;179575486 |
N2AB | 9129 | 27610;27611;27612 | chr2:178710761;178710760;178710759 | chr2:179575488;179575487;179575486 |
N2A | 8202 | 24829;24830;24831 | chr2:178710761;178710760;178710759 | chr2:179575488;179575487;179575486 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs762605364 | None | 0.939 | None | 0.491 | 0.323 | 0.475818030638 | gnomAD-4.0.0 | 2.05249E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.51902E-05 | None | 0 | 0 | 8.99423E-07 | 0 | 1.6564E-05 |
S/T | None | None | 0.079 | None | 0.188 | 0.146 | 0.304760801415 | gnomAD-4.0.0 | 6.84163E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.6564E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0997 | likely_benign | 0.1219 | benign | -0.501 | Destabilizing | 0.807 | D | 0.348 | neutral | None | None | None | None | I |
S/C | 0.1705 | likely_benign | 0.2943 | benign | -0.268 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | I |
S/D | 0.3784 | ambiguous | 0.5447 | ambiguous | -0.072 | Destabilizing | 0.953 | D | 0.47 | neutral | None | None | None | None | I |
S/E | 0.4781 | ambiguous | 0.6792 | pathogenic | -0.095 | Destabilizing | 0.953 | D | 0.481 | neutral | None | None | None | None | I |
S/F | 0.2066 | likely_benign | 0.3024 | benign | -0.683 | Destabilizing | 0.993 | D | 0.711 | prob.delet. | None | None | None | None | I |
S/G | 0.1221 | likely_benign | 0.1781 | benign | -0.734 | Destabilizing | 0.939 | D | 0.422 | neutral | None | None | None | None | I |
S/H | 0.2538 | likely_benign | 0.4573 | ambiguous | -1.202 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | I |
S/I | 0.1813 | likely_benign | 0.294 | benign | 0.001 | Stabilizing | 0.982 | D | 0.702 | prob.neutral | None | None | None | None | I |
S/K | 0.5116 | ambiguous | 0.786 | pathogenic | -0.721 | Destabilizing | 0.953 | D | 0.474 | neutral | None | None | None | None | I |
S/L | 0.135 | likely_benign | 0.1837 | benign | 0.001 | Stabilizing | 0.91 | D | 0.557 | neutral | None | None | None | None | I |
S/M | 0.252 | likely_benign | 0.3703 | ambiguous | 0.166 | Stabilizing | 0.999 | D | 0.628 | neutral | None | None | None | None | I |
S/N | 0.1436 | likely_benign | 0.2277 | benign | -0.523 | Destabilizing | 0.939 | D | 0.491 | neutral | None | None | None | None | I |
S/P | 0.7641 | likely_pathogenic | 0.9282 | pathogenic | -0.132 | Destabilizing | 0.993 | D | 0.657 | neutral | None | None | None | None | I |
S/Q | 0.4105 | ambiguous | 0.6382 | pathogenic | -0.647 | Destabilizing | 0.993 | D | 0.587 | neutral | None | None | None | None | I |
S/R | 0.3581 | ambiguous | 0.6383 | pathogenic | -0.594 | Destabilizing | 0.991 | D | 0.667 | neutral | None | None | None | None | I |
S/T | 0.0713 | likely_benign | 0.087 | benign | -0.532 | Destabilizing | 0.079 | N | 0.188 | neutral | None | None | None | None | I |
S/V | 0.2063 | likely_benign | 0.3015 | benign | -0.132 | Destabilizing | 0.91 | D | 0.546 | neutral | None | None | None | None | I |
S/W | 0.3128 | likely_benign | 0.506 | ambiguous | -0.719 | Destabilizing | 0.999 | D | 0.692 | prob.neutral | None | None | None | None | I |
S/Y | 0.1691 | likely_benign | 0.2844 | benign | -0.461 | Destabilizing | 0.998 | D | 0.702 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.