Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9447 | 28564;28565;28566 | chr2:178710758;178710757;178710756 | chr2:179575485;179575484;179575483 |
N2AB | 9130 | 27613;27614;27615 | chr2:178710758;178710757;178710756 | chr2:179575485;179575484;179575483 |
N2A | 8203 | 24832;24833;24834 | chr2:178710758;178710757;178710756 | chr2:179575485;179575484;179575483 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 0.006 | None | 0.419 | 0.234 | 0.257292322809 | gnomAD-4.0.0 | 1.591E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85778E-06 | 0 | 0 |
Y/H | rs1051050691 | None | 0.927 | None | 0.581 | 0.327 | 0.416707687347 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.86E-06 | 0 |
Y/H | rs1051050691 | None | 0.927 | None | 0.581 | 0.327 | 0.416707687347 | gnomAD-4.0.0 | 4.10499E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49711E-06 | 0 | 1.6564E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.43 | ambiguous | 0.6564 | pathogenic | -1.63 | Destabilizing | 0.495 | N | 0.573 | neutral | None | None | None | None | N |
Y/C | 0.1157 | likely_benign | 0.204 | benign | -0.536 | Destabilizing | 0.006 | N | 0.419 | neutral | None | None | None | None | N |
Y/D | 0.3103 | likely_benign | 0.5597 | ambiguous | 0.353 | Stabilizing | 0.863 | D | 0.603 | neutral | None | None | None | None | N |
Y/E | 0.6497 | likely_pathogenic | 0.8565 | pathogenic | 0.388 | Stabilizing | 0.543 | D | 0.615 | neutral | None | None | None | None | N |
Y/F | 0.0832 | likely_benign | 0.0872 | benign | -0.785 | Destabilizing | 0.002 | N | 0.26 | neutral | None | None | None | None | N |
Y/G | 0.4118 | ambiguous | 0.6543 | pathogenic | -1.893 | Destabilizing | 0.704 | D | 0.589 | neutral | None | None | None | None | N |
Y/H | 0.1775 | likely_benign | 0.3354 | benign | -0.471 | Destabilizing | 0.927 | D | 0.581 | neutral | None | None | None | None | N |
Y/I | 0.3306 | likely_benign | 0.5175 | ambiguous | -0.891 | Destabilizing | 0.543 | D | 0.559 | neutral | None | None | None | None | N |
Y/K | 0.6158 | likely_pathogenic | 0.8555 | pathogenic | -0.495 | Destabilizing | 0.543 | D | 0.611 | neutral | None | None | None | None | N |
Y/L | 0.2968 | likely_benign | 0.4529 | ambiguous | -0.891 | Destabilizing | 0.329 | N | 0.521 | neutral | None | None | None | None | N |
Y/M | 0.5134 | ambiguous | 0.6904 | pathogenic | -0.582 | Destabilizing | 0.944 | D | 0.591 | neutral | None | None | None | None | N |
Y/N | 0.1939 | likely_benign | 0.3421 | ambiguous | -0.686 | Destabilizing | 0.863 | D | 0.608 | neutral | None | None | None | None | N |
Y/P | 0.7652 | likely_pathogenic | 0.9211 | pathogenic | -1.124 | Destabilizing | 0.944 | D | 0.609 | neutral | None | None | None | None | N |
Y/Q | 0.4434 | ambiguous | 0.7415 | pathogenic | -0.65 | Destabilizing | 0.069 | N | 0.369 | neutral | None | None | None | None | N |
Y/R | 0.417 | ambiguous | 0.7023 | pathogenic | -0.092 | Destabilizing | 0.807 | D | 0.606 | neutral | None | None | None | None | N |
Y/S | 0.1629 | likely_benign | 0.2877 | benign | -1.291 | Destabilizing | 0.642 | D | 0.596 | neutral | None | None | None | None | N |
Y/T | 0.3232 | likely_benign | 0.5292 | ambiguous | -1.161 | Destabilizing | 0.704 | D | 0.601 | neutral | None | None | None | None | N |
Y/V | 0.2646 | likely_benign | 0.3973 | ambiguous | -1.124 | Destabilizing | 0.704 | D | 0.534 | neutral | None | None | None | None | N |
Y/W | 0.3631 | ambiguous | 0.4704 | ambiguous | -0.584 | Destabilizing | 0.981 | D | 0.59 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.