Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9460 | 28603;28604;28605 | chr2:178710719;178710718;178710717 | chr2:179575446;179575445;179575444 |
N2AB | 9143 | 27652;27653;27654 | chr2:178710719;178710718;178710717 | chr2:179575446;179575445;179575444 |
N2A | 8216 | 24871;24872;24873 | chr2:178710719;178710718;178710717 | chr2:179575446;179575445;179575444 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | None | None | 0.996 | None | 0.562 | 0.29 | 0.435915822735 | gnomAD-4.0.0 | 1.59137E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85793E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2971 | likely_benign | 0.3535 | ambiguous | -0.239 | Destabilizing | 0.896 | D | 0.553 | neutral | None | None | None | None | N |
D/C | 0.8269 | likely_pathogenic | 0.8723 | pathogenic | -0.03 | Destabilizing | 0.159 | N | 0.487 | neutral | None | None | None | None | N |
D/E | 0.2272 | likely_benign | 0.2698 | benign | -0.268 | Destabilizing | 0.103 | N | 0.279 | neutral | None | None | None | None | N |
D/F | 0.7696 | likely_pathogenic | 0.8371 | pathogenic | 0.124 | Stabilizing | 0.996 | D | 0.703 | prob.neutral | None | None | None | None | N |
D/G | 0.2148 | likely_benign | 0.2364 | benign | -0.504 | Destabilizing | 0.811 | D | 0.479 | neutral | None | None | None | None | N |
D/H | 0.4585 | ambiguous | 0.5634 | ambiguous | 0.246 | Stabilizing | 0.996 | D | 0.562 | neutral | None | None | None | None | N |
D/I | 0.6459 | likely_pathogenic | 0.7536 | pathogenic | 0.427 | Stabilizing | 0.988 | D | 0.699 | prob.neutral | None | None | None | None | N |
D/K | 0.5879 | likely_pathogenic | 0.6768 | pathogenic | 0.338 | Stabilizing | 0.919 | D | 0.502 | neutral | None | None | None | None | N |
D/L | 0.5654 | likely_pathogenic | 0.6789 | pathogenic | 0.427 | Stabilizing | 0.976 | D | 0.627 | neutral | None | None | None | None | N |
D/M | 0.8 | likely_pathogenic | 0.8687 | pathogenic | 0.534 | Stabilizing | 0.999 | D | 0.704 | prob.neutral | None | None | None | None | N |
D/N | 0.1464 | likely_benign | 0.1646 | benign | -0.228 | Destabilizing | 0.059 | N | 0.252 | neutral | None | None | None | None | N |
D/P | 0.9213 | likely_pathogenic | 0.9534 | pathogenic | 0.229 | Stabilizing | 0.996 | D | 0.555 | neutral | None | None | None | None | N |
D/Q | 0.4573 | ambiguous | 0.5884 | pathogenic | -0.115 | Destabilizing | 0.976 | D | 0.52 | neutral | None | None | None | None | N |
D/R | 0.5826 | likely_pathogenic | 0.6674 | pathogenic | 0.563 | Stabilizing | 0.976 | D | 0.661 | neutral | None | None | None | None | N |
D/S | 0.1743 | likely_benign | 0.2015 | benign | -0.332 | Destabilizing | 0.851 | D | 0.448 | neutral | None | None | None | None | N |
D/T | 0.3823 | ambiguous | 0.4523 | ambiguous | -0.106 | Destabilizing | 0.919 | D | 0.502 | neutral | None | None | None | None | N |
D/V | 0.4458 | ambiguous | 0.5419 | ambiguous | 0.229 | Stabilizing | 0.968 | D | 0.679 | prob.neutral | None | None | None | None | N |
D/W | 0.9373 | likely_pathogenic | 0.9637 | pathogenic | 0.326 | Stabilizing | 0.999 | D | 0.758 | deleterious | None | None | None | None | N |
D/Y | 0.4484 | ambiguous | 0.554 | ambiguous | 0.388 | Stabilizing | 0.995 | D | 0.702 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.