Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9461 | 28606;28607;28608 | chr2:178710716;178710715;178710714 | chr2:179575443;179575442;179575441 |
N2AB | 9144 | 27655;27656;27657 | chr2:178710716;178710715;178710714 | chr2:179575443;179575442;179575441 |
N2A | 8217 | 24874;24875;24876 | chr2:178710716;178710715;178710714 | chr2:179575443;179575442;179575441 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.811 | None | 0.414 | 0.164 | 0.231873229951 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3358 | likely_benign | 0.388 | ambiguous | 0.029 | Stabilizing | 0.919 | D | 0.41 | neutral | None | None | None | None | N |
K/C | 0.85 | likely_pathogenic | 0.8954 | pathogenic | -0.343 | Destabilizing | 0.999 | D | 0.493 | neutral | None | None | None | None | N |
K/D | 0.571 | likely_pathogenic | 0.5824 | pathogenic | 0.023 | Stabilizing | 0.976 | D | 0.385 | neutral | None | None | None | None | N |
K/E | 0.2156 | likely_benign | 0.1913 | benign | 0.034 | Stabilizing | 0.811 | D | 0.414 | neutral | None | None | None | None | N |
K/F | 0.8345 | likely_pathogenic | 0.8762 | pathogenic | -0.21 | Destabilizing | 0.996 | D | 0.448 | neutral | None | None | None | None | N |
K/G | 0.4514 | ambiguous | 0.5121 | ambiguous | -0.153 | Destabilizing | 0.919 | D | 0.423 | neutral | None | None | None | None | N |
K/H | 0.4005 | ambiguous | 0.4626 | ambiguous | -0.324 | Destabilizing | 0.997 | D | 0.391 | neutral | None | None | None | None | N |
K/I | 0.5048 | ambiguous | 0.5178 | ambiguous | 0.426 | Stabilizing | 0.984 | D | 0.448 | neutral | None | None | None | None | N |
K/L | 0.4675 | ambiguous | 0.5165 | ambiguous | 0.426 | Stabilizing | 0.919 | D | 0.41 | neutral | None | None | None | None | N |
K/M | 0.365 | ambiguous | 0.3802 | ambiguous | 0.074 | Stabilizing | 0.997 | D | 0.391 | neutral | None | None | None | None | N |
K/N | 0.4533 | ambiguous | 0.4683 | ambiguous | 0.109 | Stabilizing | 0.968 | D | 0.343 | neutral | None | None | None | None | N |
K/P | 0.5655 | likely_pathogenic | 0.6354 | pathogenic | 0.32 | Stabilizing | 0.076 | N | 0.244 | neutral | None | None | None | None | N |
K/Q | 0.1839 | likely_benign | 0.1944 | benign | -0.014 | Destabilizing | 0.211 | N | 0.248 | neutral | None | None | None | None | N |
K/R | 0.0902 | likely_benign | 0.0903 | benign | -0.035 | Destabilizing | 0.026 | N | 0.261 | neutral | None | None | None | None | N |
K/S | 0.4125 | ambiguous | 0.4591 | ambiguous | -0.336 | Destabilizing | 0.919 | D | 0.389 | neutral | None | None | None | None | N |
K/T | 0.2238 | likely_benign | 0.2461 | benign | -0.18 | Destabilizing | 0.896 | D | 0.392 | neutral | None | None | None | None | N |
K/V | 0.4568 | ambiguous | 0.4906 | ambiguous | 0.32 | Stabilizing | 0.988 | D | 0.389 | neutral | None | None | None | None | N |
K/W | 0.8267 | likely_pathogenic | 0.8689 | pathogenic | -0.272 | Destabilizing | 0.999 | D | 0.571 | neutral | None | None | None | None | N |
K/Y | 0.7241 | likely_pathogenic | 0.7651 | pathogenic | 0.093 | Stabilizing | 0.996 | D | 0.438 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.