Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9462 | 28609;28610;28611 | chr2:178710713;178710712;178710711 | chr2:179575440;179575439;179575438 |
N2AB | 9145 | 27658;27659;27660 | chr2:178710713;178710712;178710711 | chr2:179575440;179575439;179575438 |
N2A | 8218 | 24877;24878;24879 | chr2:178710713;178710712;178710711 | chr2:179575440;179575439;179575438 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | rs866946485 | -0.202 | 0.968 | None | 0.523 | 0.271 | 0.231231049324 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
G/V | None | None | 0.938 | None | 0.559 | 0.248 | 0.344483371355 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
G/V | None | None | 0.938 | None | 0.559 | 0.248 | 0.344483371355 | gnomAD-4.0.0 | 6.57272E-06 | None | None | None | None | N | None | 2.41418E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1047 | likely_benign | 0.1194 | benign | -0.2 | Destabilizing | 0.103 | N | 0.168 | neutral | None | None | None | None | N |
G/C | 0.3842 | ambiguous | 0.4041 | ambiguous | -0.85 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
G/D | 0.2503 | likely_benign | 0.2407 | benign | -0.372 | Destabilizing | 0.976 | D | 0.468 | neutral | None | None | None | None | N |
G/E | 0.225 | likely_benign | 0.1992 | benign | -0.533 | Destabilizing | 0.968 | D | 0.523 | neutral | None | None | None | None | N |
G/F | 0.6003 | likely_pathogenic | 0.6353 | pathogenic | -0.943 | Destabilizing | 0.976 | D | 0.649 | neutral | None | None | None | None | N |
G/H | 0.4448 | ambiguous | 0.522 | ambiguous | -0.372 | Destabilizing | 0.999 | D | 0.599 | neutral | None | None | None | None | N |
G/I | 0.2737 | likely_benign | 0.3325 | benign | -0.375 | Destabilizing | 0.952 | D | 0.636 | neutral | None | None | None | None | N |
G/K | 0.4383 | ambiguous | 0.5029 | ambiguous | -0.636 | Destabilizing | 0.976 | D | 0.52 | neutral | None | None | None | None | N |
G/L | 0.3943 | ambiguous | 0.4713 | ambiguous | -0.375 | Destabilizing | 0.076 | N | 0.426 | neutral | None | None | None | None | N |
G/M | 0.3918 | ambiguous | 0.4905 | ambiguous | -0.428 | Destabilizing | 0.993 | D | 0.641 | neutral | None | None | None | None | N |
G/N | 0.2313 | likely_benign | 0.2733 | benign | -0.323 | Destabilizing | 0.976 | D | 0.488 | neutral | None | None | None | None | N |
G/P | 0.7822 | likely_pathogenic | 0.8566 | pathogenic | -0.286 | Destabilizing | 0.988 | D | 0.601 | neutral | None | None | None | None | N |
G/Q | 0.3282 | likely_benign | 0.3755 | ambiguous | -0.589 | Destabilizing | 0.988 | D | 0.606 | neutral | None | None | None | None | N |
G/R | 0.3456 | ambiguous | 0.3777 | ambiguous | -0.216 | Destabilizing | 0.968 | D | 0.601 | neutral | None | None | None | None | N |
G/S | 0.0994 | likely_benign | 0.1026 | benign | -0.496 | Destabilizing | 0.132 | N | 0.243 | neutral | None | None | None | None | N |
G/T | 0.1303 | likely_benign | 0.1606 | benign | -0.581 | Destabilizing | 0.851 | D | 0.511 | neutral | None | None | None | None | N |
G/V | 0.1791 | likely_benign | 0.2176 | benign | -0.286 | Destabilizing | 0.938 | D | 0.559 | neutral | None | None | None | None | N |
G/W | 0.4135 | ambiguous | 0.4784 | ambiguous | -1.083 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
G/Y | 0.4586 | ambiguous | 0.523 | ambiguous | -0.733 | Destabilizing | 0.996 | D | 0.646 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.