Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9466 | 28621;28622;28623 | chr2:178710701;178710700;178710699 | chr2:179575428;179575427;179575426 |
N2AB | 9149 | 27670;27671;27672 | chr2:178710701;178710700;178710699 | chr2:179575428;179575427;179575426 |
N2A | 8222 | 24889;24890;24891 | chr2:178710701;178710700;178710699 | chr2:179575428;179575427;179575426 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | None | None | None | None | 0.151 | 0.229 | 0.126345400529 | gnomAD-4.0.0 | 1.36865E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99442E-07 | 0 | 1.65711E-05 |
Q/P | rs1215467586 | -0.066 | 0.523 | None | 0.505 | 0.359 | 0.375326005269 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Q/P | rs1215467586 | -0.066 | 0.523 | None | 0.505 | 0.359 | 0.375326005269 | gnomAD-4.0.0 | 1.36865E-06 | None | None | None | None | N | None | 5.97693E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1928 | likely_benign | 0.2342 | benign | -0.531 | Destabilizing | 0.129 | N | 0.382 | neutral | None | None | None | None | N |
Q/C | 0.5649 | likely_pathogenic | 0.72 | pathogenic | 0.09 | Stabilizing | 0.983 | D | 0.54 | neutral | None | None | None | None | N |
Q/D | 0.3185 | likely_benign | 0.3939 | ambiguous | -0.786 | Destabilizing | 0.129 | N | 0.369 | neutral | None | None | None | None | N |
Q/E | 0.0927 | likely_benign | 0.0906 | benign | -0.734 | Destabilizing | 0.001 | N | 0.127 | neutral | None | None | None | None | N |
Q/F | 0.4742 | ambiguous | 0.6001 | pathogenic | -0.481 | Destabilizing | 0.94 | D | 0.539 | neutral | None | None | None | None | N |
Q/G | 0.2764 | likely_benign | 0.3624 | ambiguous | -0.841 | Destabilizing | 0.228 | N | 0.462 | neutral | None | None | None | None | N |
Q/H | 0.172 | likely_benign | 0.219 | benign | -0.914 | Destabilizing | 0.794 | D | 0.475 | neutral | None | None | None | None | N |
Q/I | 0.2145 | likely_benign | 0.2584 | benign | 0.238 | Stabilizing | 0.836 | D | 0.566 | neutral | None | None | None | None | N |
Q/K | 0.0893 | likely_benign | 0.1038 | benign | -0.257 | Destabilizing | None | N | 0.151 | neutral | None | None | None | None | N |
Q/L | 0.0955 | likely_benign | 0.1105 | benign | 0.238 | Stabilizing | 0.351 | N | 0.487 | neutral | None | None | None | None | N |
Q/M | 0.2457 | likely_benign | 0.2889 | benign | 0.821 | Stabilizing | 0.94 | D | 0.482 | neutral | None | None | None | None | N |
Q/N | 0.2065 | likely_benign | 0.2521 | benign | -0.755 | Destabilizing | 0.418 | N | 0.354 | neutral | None | None | None | None | N |
Q/P | 0.1692 | likely_benign | 0.235 | benign | 0.013 | Stabilizing | 0.523 | D | 0.505 | neutral | None | None | None | None | N |
Q/R | 0.1006 | likely_benign | 0.1235 | benign | -0.166 | Destabilizing | 0.001 | N | 0.147 | neutral | None | None | None | None | N |
Q/S | 0.1999 | likely_benign | 0.2571 | benign | -0.775 | Destabilizing | 0.129 | N | 0.371 | neutral | None | None | None | None | N |
Q/T | 0.1483 | likely_benign | 0.1738 | benign | -0.54 | Destabilizing | 0.418 | N | 0.45 | neutral | None | None | None | None | N |
Q/V | 0.168 | likely_benign | 0.2025 | benign | 0.013 | Stabilizing | 0.418 | N | 0.485 | neutral | None | None | None | None | N |
Q/W | 0.3885 | ambiguous | 0.5366 | ambiguous | -0.394 | Destabilizing | 0.983 | D | 0.55 | neutral | None | None | None | None | N |
Q/Y | 0.3357 | likely_benign | 0.4541 | ambiguous | -0.136 | Destabilizing | 0.94 | D | 0.532 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.