Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9472 | 28639;28640;28641 | chr2:178710683;178710682;178710681 | chr2:179575410;179575409;179575408 |
N2AB | 9155 | 27688;27689;27690 | chr2:178710683;178710682;178710681 | chr2:179575410;179575409;179575408 |
N2A | 8228 | 24907;24908;24909 | chr2:178710683;178710682;178710681 | chr2:179575410;179575409;179575408 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | rs1257120493 | -1.884 | 0.003 | None | 0.317 | 0.341 | 0.6276227268 | gnomAD-2.1.1 | 1.2E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.66908E-04 | None | 0 | None | 0 | 0 | 0 |
V/G | rs1257120493 | -1.884 | 0.003 | None | 0.317 | 0.341 | 0.6276227268 | gnomAD-4.0.0 | 3.4225E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.25951E-04 | None | 0 | 0 | 0 | 0 | 0 |
V/L | None | None | 0.029 | None | 0.255 | 0.161 | 0.464784125046 | gnomAD-4.0.0 | 1.20032E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0918 | likely_benign | 0.1283 | benign | -1.373 | Destabilizing | 0.08 | N | 0.22 | neutral | None | None | None | None | I |
V/C | 0.6536 | likely_pathogenic | 0.7989 | pathogenic | -0.993 | Destabilizing | 0.991 | D | 0.475 | neutral | None | None | None | None | I |
V/D | 0.1992 | likely_benign | 0.2957 | benign | -1.295 | Destabilizing | 0.561 | D | 0.541 | neutral | None | None | None | None | I |
V/E | 0.1623 | likely_benign | 0.2169 | benign | -1.335 | Destabilizing | 0.326 | N | 0.487 | neutral | None | None | None | None | I |
V/F | 0.1126 | likely_benign | 0.1434 | benign | -1.182 | Destabilizing | 0.818 | D | 0.494 | neutral | None | None | None | None | I |
V/G | 0.1209 | likely_benign | 0.2046 | benign | -1.645 | Destabilizing | 0.003 | N | 0.317 | neutral | None | None | None | None | I |
V/H | 0.3553 | ambiguous | 0.5141 | ambiguous | -1.164 | Destabilizing | 0.901 | D | 0.518 | neutral | None | None | None | None | I |
V/I | 0.0802 | likely_benign | 0.0782 | benign | -0.745 | Destabilizing | 0.004 | N | 0.141 | neutral | None | None | None | None | I |
V/K | 0.2208 | likely_benign | 0.3428 | ambiguous | -1.163 | Destabilizing | 0.39 | N | 0.516 | neutral | None | None | None | None | I |
V/L | 0.1534 | likely_benign | 0.1804 | benign | -0.745 | Destabilizing | 0.029 | N | 0.255 | neutral | None | None | None | None | I |
V/M | 0.1125 | likely_benign | 0.109 | benign | -0.56 | Destabilizing | 0.08 | N | 0.218 | neutral | None | None | None | None | I |
V/N | 0.1249 | likely_benign | 0.2101 | benign | -0.923 | Destabilizing | 0.561 | D | 0.577 | neutral | None | None | None | None | I |
V/P | 0.8659 | likely_pathogenic | 0.9537 | pathogenic | -0.919 | Destabilizing | 0.901 | D | 0.536 | neutral | None | None | None | None | I |
V/Q | 0.1724 | likely_benign | 0.2618 | benign | -1.163 | Destabilizing | 0.103 | N | 0.379 | neutral | None | None | None | None | I |
V/R | 0.1771 | likely_benign | 0.2879 | benign | -0.58 | Destabilizing | 0.818 | D | 0.551 | neutral | None | None | None | None | I |
V/S | 0.0766 | likely_benign | 0.1212 | benign | -1.395 | Destabilizing | 0.007 | N | 0.244 | neutral | None | None | None | None | I |
V/T | 0.0842 | likely_benign | 0.1119 | benign | -1.333 | Destabilizing | 0.017 | N | 0.13 | neutral | None | None | None | None | I |
V/W | 0.6396 | likely_pathogenic | 0.7788 | pathogenic | -1.312 | Destabilizing | 0.991 | D | 0.539 | neutral | None | None | None | None | I |
V/Y | 0.3487 | ambiguous | 0.5192 | ambiguous | -1.038 | Destabilizing | 0.901 | D | 0.493 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.