Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9473 | 28642;28643;28644 | chr2:178710680;178710679;178710678 | chr2:179575407;179575406;179575405 |
N2AB | 9156 | 27691;27692;27693 | chr2:178710680;178710679;178710678 | chr2:179575407;179575406;179575405 |
N2A | 8229 | 24910;24911;24912 | chr2:178710680;178710679;178710678 | chr2:179575407;179575406;179575405 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | 1.0 | None | 0.721 | 0.634 | 0.398133443147 | gnomAD-4.0.0 | 3.18585E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.7171E-06 | 0 | 0 |
N/S | rs2076526398 | None | 0.999 | None | 0.582 | 0.553 | 0.262175524916 | gnomAD-4.0.0 | 1.59291E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43345E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9815 | likely_pathogenic | 0.9903 | pathogenic | -0.782 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
N/C | 0.9598 | likely_pathogenic | 0.9781 | pathogenic | -0.139 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
N/D | 0.9091 | likely_pathogenic | 0.9586 | pathogenic | -1.185 | Destabilizing | 0.999 | D | 0.609 | neutral | None | None | None | None | I |
N/E | 0.9936 | likely_pathogenic | 0.9961 | pathogenic | -1.083 | Destabilizing | 0.999 | D | 0.686 | prob.neutral | None | None | None | None | I |
N/F | 0.9992 | likely_pathogenic | 0.9994 | pathogenic | -0.517 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | I |
N/G | 0.9312 | likely_pathogenic | 0.9656 | pathogenic | -1.117 | Destabilizing | 0.999 | D | 0.554 | neutral | None | None | None | None | I |
N/H | 0.9421 | likely_pathogenic | 0.9704 | pathogenic | -0.928 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
N/I | 0.9933 | likely_pathogenic | 0.9956 | pathogenic | 0.073 | Stabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | I |
N/K | 0.9961 | likely_pathogenic | 0.9974 | pathogenic | -0.411 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
N/L | 0.9772 | likely_pathogenic | 0.9814 | pathogenic | 0.073 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
N/M | 0.9884 | likely_pathogenic | 0.9918 | pathogenic | 0.511 | Stabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
N/P | 0.9946 | likely_pathogenic | 0.9954 | pathogenic | -0.183 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
N/Q | 0.9925 | likely_pathogenic | 0.9969 | pathogenic | -1.087 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | I |
N/R | 0.9943 | likely_pathogenic | 0.9962 | pathogenic | -0.423 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | I |
N/S | 0.4165 | ambiguous | 0.5927 | pathogenic | -0.996 | Destabilizing | 0.999 | D | 0.582 | neutral | None | None | None | None | I |
N/T | 0.8285 | likely_pathogenic | 0.911 | pathogenic | -0.723 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | I |
N/V | 0.9907 | likely_pathogenic | 0.9937 | pathogenic | -0.183 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
N/W | 0.9995 | likely_pathogenic | 0.9996 | pathogenic | -0.321 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
N/Y | 0.9896 | likely_pathogenic | 0.993 | pathogenic | -0.078 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.