Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9476 | 28651;28652;28653 | chr2:178710671;178710670;178710669 | chr2:179575398;179575397;179575396 |
N2AB | 9159 | 27700;27701;27702 | chr2:178710671;178710670;178710669 | chr2:179575398;179575397;179575396 |
N2A | 8232 | 24919;24920;24921 | chr2:178710671;178710670;178710669 | chr2:179575398;179575397;179575396 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/V | None | None | 1.0 | None | 0.827 | 0.599 | 0.951045865265 | gnomAD-4.0.0 | 1.59372E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85922E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.6527 | likely_pathogenic | 0.8248 | pathogenic | -0.399 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | I |
G/C | 0.9011 | likely_pathogenic | 0.959 | pathogenic | -0.937 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
G/D | 0.8671 | likely_pathogenic | 0.9462 | pathogenic | -0.985 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
G/E | 0.8866 | likely_pathogenic | 0.9577 | pathogenic | -1.148 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
G/F | 0.9814 | likely_pathogenic | 0.9921 | pathogenic | -1.097 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
G/H | 0.9663 | likely_pathogenic | 0.9913 | pathogenic | -0.652 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
G/I | 0.9759 | likely_pathogenic | 0.9921 | pathogenic | -0.533 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | I |
G/K | 0.9596 | likely_pathogenic | 0.989 | pathogenic | -1.103 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
G/L | 0.9632 | likely_pathogenic | 0.9877 | pathogenic | -0.533 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
G/M | 0.9763 | likely_pathogenic | 0.992 | pathogenic | -0.564 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
G/N | 0.9229 | likely_pathogenic | 0.9726 | pathogenic | -0.711 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
G/P | 0.9975 | likely_pathogenic | 0.9991 | pathogenic | -0.456 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
G/Q | 0.9107 | likely_pathogenic | 0.9736 | pathogenic | -1.026 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
G/R | 0.8926 | likely_pathogenic | 0.9638 | pathogenic | -0.569 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
G/S | 0.5158 | ambiguous | 0.7287 | pathogenic | -0.795 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
G/T | 0.8825 | likely_pathogenic | 0.9594 | pathogenic | -0.901 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | I |
G/V | 0.9483 | likely_pathogenic | 0.9805 | pathogenic | -0.456 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
G/W | 0.948 | likely_pathogenic | 0.979 | pathogenic | -1.253 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
G/Y | 0.9661 | likely_pathogenic | 0.9888 | pathogenic | -0.932 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.