Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9477 | 28654;28655;28656 | chr2:178710668;178710667;178710666 | chr2:179575395;179575394;179575393 |
N2AB | 9160 | 27703;27704;27705 | chr2:178710668;178710667;178710666 | chr2:179575395;179575394;179575393 |
N2A | 8233 | 24922;24923;24924 | chr2:178710668;178710667;178710666 | chr2:179575395;179575394;179575393 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.008 | None | 0.258 | 0.192 | 0.301789629655 | gnomAD-4.0.0 | 1.20032E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-05 | 0 | 0 |
K/R | None | None | 0.722 | None | 0.552 | 0.202 | 0.349647731962 | gnomAD-4.0.0 | 3.18772E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.94118E-04 | 2.85919E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5607 | ambiguous | 0.5285 | ambiguous | 0.016 | Stabilizing | 0.415 | N | 0.599 | neutral | None | None | None | None | I |
K/C | 0.9049 | likely_pathogenic | 0.9126 | pathogenic | -0.251 | Destabilizing | 0.996 | D | 0.711 | prob.delet. | None | None | None | None | I |
K/D | 0.7266 | likely_pathogenic | 0.7552 | pathogenic | -0.007 | Destabilizing | 0.633 | D | 0.617 | neutral | None | None | None | None | I |
K/E | 0.2117 | likely_benign | 0.1778 | benign | 0.005 | Stabilizing | 0.008 | N | 0.258 | neutral | None | None | None | None | I |
K/F | 0.8919 | likely_pathogenic | 0.8945 | pathogenic | -0.134 | Destabilizing | 0.987 | D | 0.679 | prob.neutral | None | None | None | None | I |
K/G | 0.6456 | likely_pathogenic | 0.6564 | pathogenic | -0.195 | Destabilizing | 0.775 | D | 0.62 | neutral | None | None | None | None | I |
K/H | 0.4657 | ambiguous | 0.5008 | ambiguous | -0.425 | Destabilizing | 0.989 | D | 0.615 | neutral | None | None | None | None | I |
K/I | 0.6059 | likely_pathogenic | 0.5772 | pathogenic | 0.494 | Stabilizing | 0.949 | D | 0.665 | neutral | None | None | None | None | I |
K/L | 0.6091 | likely_pathogenic | 0.6166 | pathogenic | 0.494 | Stabilizing | 0.775 | D | 0.59 | neutral | None | None | None | None | I |
K/M | 0.3758 | ambiguous | 0.3605 | ambiguous | 0.217 | Stabilizing | 0.996 | D | 0.621 | neutral | None | None | None | None | I |
K/N | 0.5311 | ambiguous | 0.5488 | ambiguous | 0.166 | Stabilizing | 0.722 | D | 0.583 | neutral | None | None | None | None | I |
K/P | 0.9345 | likely_pathogenic | 0.9513 | pathogenic | 0.363 | Stabilizing | 0.961 | D | 0.608 | neutral | None | None | None | None | I |
K/Q | 0.1792 | likely_benign | 0.171 | benign | -0.006 | Destabilizing | 0.82 | D | 0.591 | neutral | None | None | None | None | I |
K/R | 0.0977 | likely_benign | 0.102 | benign | -0.067 | Destabilizing | 0.722 | D | 0.552 | neutral | None | None | None | None | I |
K/S | 0.5224 | ambiguous | 0.4968 | ambiguous | -0.31 | Destabilizing | 0.118 | N | 0.226 | neutral | None | None | None | None | I |
K/T | 0.2813 | likely_benign | 0.2401 | benign | -0.149 | Destabilizing | 0.565 | D | 0.629 | neutral | None | None | None | None | I |
K/V | 0.5616 | ambiguous | 0.5316 | ambiguous | 0.363 | Stabilizing | 0.923 | D | 0.584 | neutral | None | None | None | None | I |
K/W | 0.8787 | likely_pathogenic | 0.8849 | pathogenic | -0.143 | Destabilizing | 0.996 | D | 0.715 | prob.delet. | None | None | None | None | I |
K/Y | 0.7882 | likely_pathogenic | 0.8118 | pathogenic | 0.201 | Stabilizing | 0.987 | D | 0.673 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.