Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9479 | 28660;28661;28662 | chr2:178710662;178710661;178710660 | chr2:179575389;179575388;179575387 |
N2AB | 9162 | 27709;27710;27711 | chr2:178710662;178710661;178710660 | chr2:179575389;179575388;179575387 |
N2A | 8235 | 24928;24929;24930 | chr2:178710662;178710661;178710660 | chr2:179575389;179575388;179575387 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 0.983 | None | 0.531 | 0.513 | 0.675278370098 | gnomAD-4.0.0 | 1.59464E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86048E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0896 | likely_benign | 0.0995 | benign | -0.81 | Destabilizing | 0.007 | N | 0.181 | neutral | None | None | None | None | N |
S/C | 0.1633 | likely_benign | 0.2371 | benign | -0.356 | Destabilizing | 0.983 | D | 0.531 | neutral | None | None | None | None | N |
S/D | 0.5656 | likely_pathogenic | 0.6253 | pathogenic | 0.257 | Stabilizing | 0.854 | D | 0.499 | neutral | None | None | None | None | N |
S/E | 0.5737 | likely_pathogenic | 0.65 | pathogenic | 0.255 | Stabilizing | 0.742 | D | 0.489 | neutral | None | None | None | None | N |
S/F | 0.151 | likely_benign | 0.1806 | benign | -0.939 | Destabilizing | 0.015 | N | 0.457 | neutral | None | None | None | None | N |
S/G | 0.1581 | likely_benign | 0.2065 | benign | -1.057 | Destabilizing | 0.59 | D | 0.501 | neutral | None | None | None | None | N |
S/H | 0.3526 | ambiguous | 0.4424 | ambiguous | -1.368 | Destabilizing | 0.996 | D | 0.532 | neutral | None | None | None | None | N |
S/I | 0.1577 | likely_benign | 0.1955 | benign | -0.256 | Destabilizing | 0.59 | D | 0.541 | neutral | None | None | None | None | N |
S/K | 0.6781 | likely_pathogenic | 0.7801 | pathogenic | -0.52 | Destabilizing | 0.742 | D | 0.488 | neutral | None | None | None | None | N |
S/L | 0.1164 | likely_benign | 0.1416 | benign | -0.256 | Destabilizing | 0.009 | N | 0.42 | neutral | None | None | None | None | N |
S/M | 0.2141 | likely_benign | 0.2743 | benign | -0.054 | Destabilizing | 0.91 | D | 0.545 | neutral | None | None | None | None | N |
S/N | 0.1885 | likely_benign | 0.2323 | benign | -0.375 | Destabilizing | 0.854 | D | 0.512 | neutral | None | None | None | None | N |
S/P | 0.8596 | likely_pathogenic | 0.9385 | pathogenic | -0.407 | Destabilizing | 0.939 | D | 0.553 | neutral | None | None | None | None | N |
S/Q | 0.5072 | ambiguous | 0.6109 | pathogenic | -0.491 | Destabilizing | 0.953 | D | 0.502 | neutral | None | None | None | None | N |
S/R | 0.5506 | ambiguous | 0.643 | pathogenic | -0.429 | Destabilizing | 0.953 | D | 0.555 | neutral | None | None | None | None | N |
S/T | 0.086 | likely_benign | 0.0951 | benign | -0.481 | Destabilizing | 0.028 | N | 0.316 | neutral | None | None | None | None | N |
S/V | 0.1799 | likely_benign | 0.2123 | benign | -0.407 | Destabilizing | 0.037 | N | 0.466 | neutral | None | None | None | None | N |
S/W | 0.3679 | ambiguous | 0.4533 | ambiguous | -0.885 | Destabilizing | 0.996 | D | 0.641 | neutral | None | None | None | None | N |
S/Y | 0.1612 | likely_benign | 0.2077 | benign | -0.64 | Destabilizing | 0.792 | D | 0.591 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.