Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9484 | 28675;28676;28677 | chr2:178710647;178710646;178710645 | chr2:179575374;179575373;179575372 |
N2AB | 9167 | 27724;27725;27726 | chr2:178710647;178710646;178710645 | chr2:179575374;179575373;179575372 |
N2A | 8240 | 24943;24944;24945 | chr2:178710647;178710646;178710645 | chr2:179575374;179575373;179575372 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1378540444 | None | 0.999 | None | 0.885 | 0.667 | 0.859033133088 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/P | rs1378540444 | None | 0.999 | None | 0.885 | 0.667 | 0.859033133088 | gnomAD-4.0.0 | 2.57691E-06 | None | None | None | None | N | None | 1.69538E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.40781E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8767 | likely_pathogenic | 0.9448 | pathogenic | -3.031 | Highly Destabilizing | 0.983 | D | 0.727 | prob.delet. | None | None | None | None | N |
L/C | 0.8712 | likely_pathogenic | 0.9165 | pathogenic | -2.57 | Highly Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
L/D | 0.9977 | likely_pathogenic | 0.999 | pathogenic | -3.478 | Highly Destabilizing | 0.999 | D | 0.884 | deleterious | None | None | None | None | N |
L/E | 0.9864 | likely_pathogenic | 0.9935 | pathogenic | -3.217 | Highly Destabilizing | 0.999 | D | 0.899 | deleterious | None | None | None | None | N |
L/F | 0.4874 | ambiguous | 0.5815 | pathogenic | -1.867 | Destabilizing | 0.998 | D | 0.762 | deleterious | None | None | None | None | N |
L/G | 0.9492 | likely_pathogenic | 0.9852 | pathogenic | -3.622 | Highly Destabilizing | 0.999 | D | 0.899 | deleterious | None | None | None | None | N |
L/H | 0.9714 | likely_pathogenic | 0.9877 | pathogenic | -3.024 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
L/I | 0.1845 | likely_benign | 0.2169 | benign | -1.286 | Destabilizing | 0.437 | N | 0.351 | neutral | None | None | None | None | N |
L/K | 0.9761 | likely_pathogenic | 0.9907 | pathogenic | -2.37 | Highly Destabilizing | 0.999 | D | 0.886 | deleterious | None | None | None | None | N |
L/M | 0.2342 | likely_benign | 0.3052 | benign | -1.379 | Destabilizing | 0.997 | D | 0.726 | prob.delet. | None | None | None | None | N |
L/N | 0.9845 | likely_pathogenic | 0.9941 | pathogenic | -2.849 | Highly Destabilizing | 0.999 | D | 0.897 | deleterious | None | None | None | None | N |
L/P | 0.9904 | likely_pathogenic | 0.9962 | pathogenic | -1.853 | Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | N |
L/Q | 0.9413 | likely_pathogenic | 0.9765 | pathogenic | -2.66 | Highly Destabilizing | 0.999 | D | 0.886 | deleterious | None | None | None | None | N |
L/R | 0.957 | likely_pathogenic | 0.9804 | pathogenic | -2.089 | Highly Destabilizing | 0.999 | D | 0.871 | deleterious | None | None | None | None | N |
L/S | 0.9799 | likely_pathogenic | 0.992 | pathogenic | -3.584 | Highly Destabilizing | 0.998 | D | 0.879 | deleterious | None | None | None | None | N |
L/T | 0.93 | likely_pathogenic | 0.9658 | pathogenic | -3.165 | Highly Destabilizing | 0.995 | D | 0.819 | deleterious | None | None | None | None | N |
L/V | 0.2298 | likely_benign | 0.2454 | benign | -1.853 | Destabilizing | 0.37 | N | 0.341 | neutral | None | None | None | None | N |
L/W | 0.8794 | likely_pathogenic | 0.9275 | pathogenic | -2.252 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
L/Y | 0.9122 | likely_pathogenic | 0.95 | pathogenic | -2.044 | Highly Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.