Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9494 | 28705;28706;28707 | chr2:178709839;178709838;178709837 | chr2:179574566;179574565;179574564 |
N2AB | 9177 | 27754;27755;27756 | chr2:178709839;178709838;178709837 | chr2:179574566;179574565;179574564 |
N2A | 8250 | 24973;24974;24975 | chr2:178709839;178709838;178709837 | chr2:179574566;179574565;179574564 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | rs1553886767 | None | 0.978 | None | 0.512 | 0.446 | 0.437207349437 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
S/N | None | None | 0.002 | None | 0.23 | 0.136 | 0.193865811164 | gnomAD-4.0.0 | 1.59582E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77454E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0853 | likely_benign | 0.0908 | benign | -0.36 | Destabilizing | 0.129 | N | 0.321 | neutral | None | None | None | None | N |
S/C | 0.1358 | likely_benign | 0.182 | benign | -0.382 | Destabilizing | 0.978 | D | 0.512 | neutral | None | None | None | None | N |
S/D | 0.604 | likely_pathogenic | 0.7306 | pathogenic | 0.509 | Stabilizing | 0.002 | N | 0.213 | neutral | None | None | None | None | N |
S/E | 0.6199 | likely_pathogenic | 0.7439 | pathogenic | 0.454 | Stabilizing | 0.129 | N | 0.415 | neutral | None | None | None | None | N |
S/F | 0.2134 | likely_benign | 0.2593 | benign | -0.962 | Destabilizing | 0.716 | D | 0.534 | neutral | None | None | None | None | N |
S/G | 0.1292 | likely_benign | 0.1526 | benign | -0.487 | Destabilizing | 0.101 | N | 0.403 | neutral | None | None | None | None | N |
S/H | 0.3665 | ambiguous | 0.5211 | ambiguous | -0.792 | Destabilizing | 0.716 | D | 0.529 | neutral | None | None | None | None | N |
S/I | 0.14 | likely_benign | 0.1827 | benign | -0.15 | Destabilizing | 0.213 | N | 0.525 | neutral | None | None | None | None | N |
S/K | 0.7014 | likely_pathogenic | 0.8295 | pathogenic | -0.207 | Destabilizing | 0.264 | N | 0.441 | neutral | None | None | None | None | N |
S/L | 0.1048 | likely_benign | 0.1363 | benign | -0.15 | Destabilizing | 0.129 | N | 0.489 | neutral | None | None | None | None | N |
S/M | 0.1931 | likely_benign | 0.2511 | benign | -0.217 | Destabilizing | 0.061 | N | 0.435 | neutral | None | None | None | None | N |
S/N | 0.1554 | likely_benign | 0.23 | benign | -0.11 | Destabilizing | 0.002 | N | 0.23 | neutral | None | None | None | None | N |
S/P | 0.882 | likely_pathogenic | 0.9468 | pathogenic | -0.191 | Destabilizing | 0.593 | D | 0.565 | neutral | None | None | None | None | N |
S/Q | 0.4885 | ambiguous | 0.6433 | pathogenic | -0.221 | Destabilizing | 0.716 | D | 0.542 | neutral | None | None | None | None | N |
S/R | 0.5966 | likely_pathogenic | 0.7419 | pathogenic | -0.069 | Destabilizing | 0.655 | D | 0.564 | neutral | None | None | None | None | N |
S/T | 0.0678 | likely_benign | 0.0723 | benign | -0.197 | Destabilizing | 0.007 | N | 0.211 | neutral | None | None | None | None | N |
S/V | 0.1357 | likely_benign | 0.1636 | benign | -0.191 | Destabilizing | 0.01 | N | 0.439 | neutral | None | None | None | None | N |
S/W | 0.5193 | ambiguous | 0.6359 | pathogenic | -1.013 | Destabilizing | 0.983 | D | 0.58 | neutral | None | None | None | None | N |
S/Y | 0.2318 | likely_benign | 0.3003 | benign | -0.678 | Destabilizing | 0.94 | D | 0.557 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.