Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9499 | 28720;28721;28722 | chr2:178709824;178709823;178709822 | chr2:179574551;179574550;179574549 |
N2AB | 9182 | 27769;27770;27771 | chr2:178709824;178709823;178709822 | chr2:179574551;179574550;179574549 |
N2A | 8255 | 24988;24989;24990 | chr2:178709824;178709823;178709822 | chr2:179574551;179574550;179574549 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1060500573 | None | 0.998 | None | 0.492 | 0.265 | 0.396794106654 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/F | rs1060500573 | None | 0.998 | None | 0.492 | 0.265 | 0.396794106654 | gnomAD-4.0.0 | 3.10111E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69604E-06 | 2.19833E-05 | 1.60236E-05 |
L/P | None | None | 0.031 | None | 0.352 | 0.175 | 0.586326688876 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8245 | likely_pathogenic | 0.9027 | pathogenic | -1.987 | Destabilizing | 0.97 | D | 0.521 | neutral | None | None | None | None | I |
L/C | 0.8955 | likely_pathogenic | 0.9446 | pathogenic | -1.435 | Destabilizing | 1.0 | D | 0.575 | neutral | None | None | None | None | I |
L/D | 0.9899 | likely_pathogenic | 0.9973 | pathogenic | -0.799 | Destabilizing | 0.996 | D | 0.607 | neutral | None | None | None | None | I |
L/E | 0.9675 | likely_pathogenic | 0.9905 | pathogenic | -0.697 | Destabilizing | 0.996 | D | 0.56 | neutral | None | None | None | None | I |
L/F | 0.4287 | ambiguous | 0.6436 | pathogenic | -1.206 | Destabilizing | 0.998 | D | 0.492 | neutral | None | None | None | None | I |
L/G | 0.9543 | likely_pathogenic | 0.982 | pathogenic | -2.419 | Highly Destabilizing | 0.996 | D | 0.533 | neutral | None | None | None | None | I |
L/H | 0.9266 | likely_pathogenic | 0.9804 | pathogenic | -1.537 | Destabilizing | 1.0 | D | 0.626 | neutral | None | None | None | None | I |
L/I | 0.1707 | likely_benign | 0.2331 | benign | -0.821 | Destabilizing | 0.993 | D | 0.489 | neutral | None | None | None | None | I |
L/K | 0.957 | likely_pathogenic | 0.9879 | pathogenic | -1.222 | Destabilizing | 0.996 | D | 0.515 | neutral | None | None | None | None | I |
L/M | 0.2572 | likely_benign | 0.369 | ambiguous | -0.778 | Destabilizing | 0.999 | D | 0.512 | neutral | None | None | None | None | I |
L/N | 0.9502 | likely_pathogenic | 0.985 | pathogenic | -1.158 | Destabilizing | 0.999 | D | 0.619 | neutral | None | None | None | None | I |
L/P | 0.4267 | ambiguous | 0.655 | pathogenic | -1.181 | Destabilizing | 0.031 | N | 0.352 | neutral | None | None | None | None | I |
L/Q | 0.8926 | likely_pathogenic | 0.9693 | pathogenic | -1.169 | Destabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | I |
L/R | 0.9296 | likely_pathogenic | 0.9788 | pathogenic | -0.834 | Destabilizing | 0.998 | D | 0.621 | neutral | None | None | None | None | I |
L/S | 0.9457 | likely_pathogenic | 0.9839 | pathogenic | -2.024 | Highly Destabilizing | 0.996 | D | 0.509 | neutral | None | None | None | None | I |
L/T | 0.8559 | likely_pathogenic | 0.939 | pathogenic | -1.775 | Destabilizing | 0.985 | D | 0.535 | neutral | None | None | None | None | I |
L/V | 0.2371 | likely_benign | 0.3467 | ambiguous | -1.181 | Destabilizing | 0.98 | D | 0.497 | neutral | None | None | None | None | I |
L/W | 0.8503 | likely_pathogenic | 0.9546 | pathogenic | -1.27 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | I |
L/Y | 0.9076 | likely_pathogenic | 0.973 | pathogenic | -1.048 | Destabilizing | 0.999 | D | 0.571 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.